BLASTX nr result

ID: Cheilocostus21_contig00042071 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042071
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO37767.1| hypothetical protein CISIN_1g046558mg, partial [C...    54   4e-06

>gb|KDO37767.1| hypothetical protein CISIN_1g046558mg, partial [Citrus sinensis]
          Length = 136

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = -1

Query: 545 PPSSGWIKINVDESYKKTTKSAGIGYVIWDHTSHCFIAYAEVVEPI-ETELLAIRSEISY 369
           PP  GW+K+NVD++  +    AG+G V+ +H      A     +   + EL   ++ +  
Sbjct: 17  PPEEGWLKVNVDDAMDRVNYLAGLGAVVKNHKGETVAAAVSTFKSSGDVELSEAKAVLWG 76

Query: 368 VYARSESIGSKVIFETDCRNSIAMLRNECSFIQDSVWTI 252
           + A +++  + VI E+D +  I ++ N+ S + D+ W I
Sbjct: 77  MQAAAKAGATSVILESDSKGVIELINNKRSTLTDTFWVI 115


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