BLASTX nr result
ID: Cheilocostus21_contig00041827
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00041827
(2881 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHA13001.1| RNA polymerase beta (plastid) [Costus pulverulentus] 1076 0.0
gb|AHA12915.1| RNA polymerase beta (plastid) [Monocostus uniflorus] 1064 0.0
ref|YP_007475610.1| RNA polymerase beta [Heliconia collinsiana] ... 1045 0.0
gb|AHA13173.1| RNA polymerase beta (plastid) [Thaumatococcus dan... 1034 0.0
ref|YP_009415209.1| RNA polymerase beta (chloroplast) [Musella l... 1031 0.0
gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast... 1030 0.0
ref|YP_009420564.1| RNA polymerase beta (chloroplast) [Musa itin... 1030 0.0
emb|CCW72366.1| rpoC1 (chloroplast) [Musa acuminata subsp. malac... 1030 0.0
ref|YP_008854416.1| RNA polymerase beta [Musa textilis] >gi|9533... 1028 0.0
ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhe... 1025 0.0
gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon jap... 1025 0.0
gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena as... 1024 0.0
gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus aspa... 1023 0.0
ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus... 1023 0.0
ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [C... 1023 0.0
ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonat... 1023 0.0
ref|YP_009334903.1| RNA polymerase beta (chloroplast) [Hesperalo... 1023 0.0
ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonat... 1022 0.0
gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata] 1022 0.0
gb|AHA12746.1| RNA polymerase beta (plastid) [Canna indica] 1022 0.0
>gb|AHA13001.1| RNA polymerase beta (plastid) [Costus pulverulentus]
Length = 687
Score = 1076 bits (2782), Expect = 0.0
Identities = 539/553 (97%), Positives = 542/553 (98%), Gaps = 2/553 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPIVKKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIVKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA+HVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAIHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 560
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV
Sbjct: 561 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 620
Query: 1521 PIEVQYES--LGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYRE 1694
P+EVQYES LGTYHEIYGHYLI VESVTKVESVTKEIRCIYIRTTLGHISFYRE
Sbjct: 621 PVEVQYESLGLGTYHEIYGHYLI------VESVTKVESVTKEIRCIYIRTTLGHISFYRE 674
Query: 1695 IEEAIQGFCRAYS 1733
IEEAIQGFCRAYS
Sbjct: 675 IEEAIQGFCRAYS 687
>gb|AHA12915.1| RNA polymerase beta (plastid) [Monocostus uniflorus]
Length = 679
Score = 1064 bits (2751), Expect = 0.0
Identities = 532/551 (96%), Positives = 535/551 (97%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPIVKKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIVKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 560
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
NYQN+TVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRI+GSREV
Sbjct: 561 ENYQNQTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIVGSREV 620
Query: 1521 PIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIE 1700
PIEVQYESLGTYHEIYGHYLI VESVTKEIRCIYIRTTLGHISFYREIE
Sbjct: 621 PIEVQYESLGTYHEIYGHYLI------------VESVTKEIRCIYIRTTLGHISFYREIE 668
Query: 1701 EAIQGFCRAYS 1733
EAIQGFCRAYS
Sbjct: 669 EAIQGFCRAYS 679
>ref|YP_007475610.1| RNA polymerase beta [Heliconia collinsiana]
gb|AGE92675.1| RNA polymerase beta (plastid) [Heliconia collinsiana]
Length = 684
Score = 1045 bits (2702), Expect = 0.0
Identities = 523/553 (94%), Positives = 529/553 (95%), Gaps = 2/553 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPI KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRII GNSLVEWKELG+EGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIIMGNSLVEWKELGQEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNPYSC
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYSC 560
Query: 1341 GNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSR 1514
GNYQNKTVDNNNNDY+Y KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQR+IGSR
Sbjct: 561 GNYQNKTVDNNNNDYRYTKEKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRVIGSR 620
Query: 1515 EVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYRE 1694
EVPIEVQYESLGTYHEIYGHYLI V SVTKEIRCIYIRTTLGHISFYRE
Sbjct: 621 EVPIEVQYESLGTYHEIYGHYLI------------VGSVTKEIRCIYIRTTLGHISFYRE 668
Query: 1695 IEEAIQGFCRAYS 1733
IEEAIQGFCRAYS
Sbjct: 669 IEEAIQGFCRAYS 681
>gb|AHA13173.1| RNA polymerase beta (plastid) [Thaumatococcus daniellii]
Length = 687
Score = 1034 bits (2674), Expect = 0.0
Identities = 519/555 (93%), Positives = 527/555 (94%), Gaps = 4/555 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARP+ KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPVAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRI+TGNSLVEWKELGEE S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRILTGNSLVEWKELGEERSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQD LIGLYLLTIGNRRGIC NRYNPYSC
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDTLIGLYLLTIGNRRGICANRYNPYSC 560
Query: 1341 GNYQNKTV--DNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIG 1508
GNYQNKTV DNNNNDY+Y KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQR+IG
Sbjct: 561 GNYQNKTVDNDNNNNDYRYTKQKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRVIG 620
Query: 1509 SREVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFY 1688
SREVP+EVQYESLGTYHEIYGHYLI V SVTKEIRCIYIRTTLGHISFY
Sbjct: 621 SREVPVEVQYESLGTYHEIYGHYLI------------VVSVTKEIRCIYIRTTLGHISFY 668
Query: 1689 REIEEAIQGFCRAYS 1733
REI EAIQGFCRAYS
Sbjct: 669 REIAEAIQGFCRAYS 683
>ref|YP_009415209.1| RNA polymerase beta (chloroplast) [Musella lasiocarpa]
gb|ASL69855.1| RNA polymerase beta (chloroplast) [Musella lasiocarpa]
Length = 686
Score = 1031 bits (2667), Expect = 0.0
Identities = 518/555 (93%), Positives = 527/555 (94%), Gaps = 4/555 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPIVKKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIVKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRIITGNSLVEWKELGEEGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIITGNSLVEWKELGEEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVW+I
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWKI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVM+GHPVLLNRAPTLHRLGIQAFQP LVEGRAICLHPLVCKGFNADFDGDQMA+HVP
Sbjct: 441 LQEVMRGHPVLLNRAPTLHRLGIQAFQPFLVEGRAICLHPLVCKGFNADFDGDQMAIHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNP--Y 1334
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNP Y
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYRY 560
Query: 1335 SCGNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIG 1508
SCGNYQNK VDN NDY+Y KEPYFSSSYDALGAY+QKRISLDSPLWLRWRLDQR+IG
Sbjct: 561 SCGNYQNKKVDNKKNDYRYTKKKEPYFSSSYDALGAYQQKRISLDSPLWLRWRLDQRVIG 620
Query: 1509 SREVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFY 1688
SREVPIEVQYESLGTYHEIYGHYLI V SVTKEIRCIYIRTTLGHISFY
Sbjct: 621 SREVPIEVQYESLGTYHEIYGHYLI------------VGSVTKEIRCIYIRTTLGHISFY 668
Query: 1689 REIEEAIQGFCRAYS 1733
REIEEAIQGFCRAYS
Sbjct: 669 REIEEAIQGFCRAYS 683
>gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast) [Musa acuminata]
Length = 695
Score = 1030 bits (2664), Expect = 0.0
Identities = 519/554 (93%), Positives = 525/554 (94%), Gaps = 4/554 (0%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YLDFSFARPI KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 154 YLDFSFARPIAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIRE 213
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLAD DLRIITGNSLVEWKELGEEGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 214 QLADSDLRIITGNSLVEWKELGEEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 273
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 274 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 333
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 334 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 393
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL
Sbjct: 394 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 453
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVM+GHPVLLNRAPTLHRLGIQAFQP LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 454 QEVMRGHPVLLNRAPTLHRLGIQAFQPFLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 513
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNP--YS 1337
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNP YS
Sbjct: 514 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYRYS 573
Query: 1338 CGNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGS 1511
CGNYQNK VDN NDY+Y KEPYFSSSYDALGAY+QKRISLDSPLWLRWRLDQR+IGS
Sbjct: 574 CGNYQNKKVDNKKNDYRYTEKKEPYFSSSYDALGAYQQKRISLDSPLWLRWRLDQRVIGS 633
Query: 1512 REVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYR 1691
REVPIEVQYESLGTYHEIYGHYLI SVTKEIRCIYIRTTLGHISFYR
Sbjct: 634 REVPIEVQYESLGTYHEIYGHYLI------------EGSVTKEIRCIYIRTTLGHISFYR 681
Query: 1692 EIEEAIQGFCRAYS 1733
EIEEAIQGFCRAYS
Sbjct: 682 EIEEAIQGFCRAYS 695
>ref|YP_009420564.1| RNA polymerase beta (chloroplast) [Musa itinerans]
gb|ASO76252.1| RNA polymerase beta (chloroplast) [Musa itinerans]
Length = 689
Score = 1030 bits (2663), Expect = 0.0
Identities = 518/554 (93%), Positives = 525/554 (94%), Gaps = 4/554 (0%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YLDFSFARPI KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 145 YLDFSFARPIAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIRE 204
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLAD DLRIITGNSLVEWKELGEEGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 205 QLADSDLRIITGNSLVEWKELGEEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 264
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 265 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 324
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 325 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 384
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL
Sbjct: 385 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 444
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVM+GHPVLLNRAPTLHRLGIQAFQP LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 445 QEVMRGHPVLLNRAPTLHRLGIQAFQPFLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 504
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNP--YS 1337
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNP YS
Sbjct: 505 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYRYS 564
Query: 1338 CGNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGS 1511
CGNYQNK VDN NDY+Y KEPYFSSSYDALGAY+QKRISLDSPLWLRWRLDQR+IGS
Sbjct: 565 CGNYQNKKVDNKKNDYRYTKKKEPYFSSSYDALGAYQQKRISLDSPLWLRWRLDQRVIGS 624
Query: 1512 REVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYR 1691
REVPIEVQYESLGTYHEIYGHYLI S+TKEIRCIYIRTTLGHISFYR
Sbjct: 625 REVPIEVQYESLGTYHEIYGHYLI------------EGSITKEIRCIYIRTTLGHISFYR 672
Query: 1692 EIEEAIQGFCRAYS 1733
EIEEAIQGFCRAYS
Sbjct: 673 EIEEAIQGFCRAYS 686
>emb|CCW72366.1| rpoC1 (chloroplast) [Musa acuminata subsp. malaccensis]
Length = 686
Score = 1030 bits (2662), Expect = 0.0
Identities = 518/555 (93%), Positives = 525/555 (94%), Gaps = 4/555 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPI KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRIITGNSLVEWKELGEEGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIITGNSLVEWKELGEEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVM+GHPVLLNRAPTLHRLGIQAFQP LVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMRGHPVLLNRAPTLHRLGIQAFQPFLVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNP--Y 1334
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNP Y
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYRY 560
Query: 1335 SCGNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIG 1508
SCGNYQNK VDN NDY+Y KEPYFSSSYDALGAY+QKRISLDSPLWLRWRLDQR+IG
Sbjct: 561 SCGNYQNKKVDNKKNDYRYTEKKEPYFSSSYDALGAYQQKRISLDSPLWLRWRLDQRVIG 620
Query: 1509 SREVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFY 1688
SREVPIEVQYESLGTYHEIYGHYLI SVTKEIRCIYIRTTLGHISFY
Sbjct: 621 SREVPIEVQYESLGTYHEIYGHYLI------------EGSVTKEIRCIYIRTTLGHISFY 668
Query: 1689 REIEEAIQGFCRAYS 1733
REIEEAIQGFCRAYS
Sbjct: 669 REIEEAIQGFCRAYS 683
>ref|YP_008854416.1| RNA polymerase beta [Musa textilis]
ref|YP_009180362.1| RNA polymerase beta (chloroplast) [Musa balbisiana]
gb|AHA12505.1| RNA polymerase beta (plastid) [Musa textilis]
gb|ALL97033.1| RNA polymerase beta (chloroplast) [Musa balbisiana]
Length = 686
Score = 1028 bits (2657), Expect = 0.0
Identities = 517/555 (93%), Positives = 524/555 (94%), Gaps = 4/555 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPI KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFE FRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPIAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFEAFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRIITGNSLVEWKELGEEGS GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIITGNSLVEWKELGEEGSTGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVM+GHPVLLNRAPTLHRLGIQAFQP LVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMRGHPVLLNRAPTLHRLGIQAFQPFLVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNP--Y 1334
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYNP Y
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYRY 560
Query: 1335 SCGNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIG 1508
SCGNYQNK VDN NDY+Y KEPYFSSSYDALGAY+QKRISLDSPLWLRWRLDQR+IG
Sbjct: 561 SCGNYQNKKVDNKKNDYRYTKKKEPYFSSSYDALGAYQQKRISLDSPLWLRWRLDQRVIG 620
Query: 1509 SREVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFY 1688
SREVPIEVQYESLGTYHEIYGHYLI SVTKEIRCIYIRTTLGHISFY
Sbjct: 621 SREVPIEVQYESLGTYHEIYGHYLI------------EGSVTKEIRCIYIRTTLGHISFY 668
Query: 1689 REIEEAIQGFCRAYS 1733
REIEEAIQGFCRAYS
Sbjct: 669 REIEEAIQGFCRAYS 683
>ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
gb|APO11291.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
Length = 682
Score = 1025 bits (2651), Expect = 0.0
Identities = 507/551 (92%), Positives = 521/551 (94%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIR
Sbjct: 141 VYCDFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLADLDLRII NSLVEWKELG+E S+GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADLDLRIIIDNSLVEWKELGDEESVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+C
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNC 560
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
GNYQNKTVDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLDQR+IGSREV
Sbjct: 561 GNYQNKTVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREV 620
Query: 1521 PIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIE 1700
PIEVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+G +SFYREIE
Sbjct: 621 PIEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTMGRVSFYREIE 668
Query: 1701 EAIQGFCRAYS 1733
EA+QGFCRAYS
Sbjct: 669 EAVQGFCRAYS 679
>gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon japonicus]
Length = 685
Score = 1025 bits (2649), Expect = 0.0
Identities = 509/550 (92%), Positives = 520/550 (94%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YL FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 145 YLHFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 204
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 205 QLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 264
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 265 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 324
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 325 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 384
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEP+VWEIL
Sbjct: 385 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPVVWEIL 444
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 445 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 504
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSCG 1343
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+CG
Sbjct: 505 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCG 564
Query: 1344 NYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREVP 1523
NYQNK VDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSREVP
Sbjct: 565 NYQNKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP 624
Query: 1524 IEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIEE 1703
IEVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+GH+SFYREIEE
Sbjct: 625 IEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTVGHVSFYREIEE 672
Query: 1704 AIQGFCRAYS 1733
AIQGFCRAYS
Sbjct: 673 AIQGFCRAYS 682
>gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
Length = 685
Score = 1024 bits (2648), Expect = 0.0
Identities = 507/550 (92%), Positives = 521/550 (94%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YL+FSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIRE
Sbjct: 145 YLNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIRE 204
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLADLDLRII NSLVEWKELG+E S+GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 205 QLADLDLRIIIDNSLVEWKELGDEESVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 264
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 265 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 324
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 325 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 384
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEIL
Sbjct: 385 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEIL 444
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 445 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 504
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSCG 1343
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+CG
Sbjct: 505 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCG 564
Query: 1344 NYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREVP 1523
NYQNKTVDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLDQR+IGSREVP
Sbjct: 565 NYQNKTVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVP 624
Query: 1524 IEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIEE 1703
IEVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+G +SFYREIEE
Sbjct: 625 IEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTMGRVSFYREIEE 672
Query: 1704 AIQGFCRAYS 1733
A+QGFCRAYS
Sbjct: 673 AVQGFCRAYS 682
>gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus asparagoides]
Length = 689
Score = 1023 bits (2646), Expect = 0.0
Identities = 508/552 (92%), Positives = 523/552 (94%), Gaps = 2/552 (0%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YL+FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 147 YLNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 206
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLADLDLRII NSLVEWKELG+E +GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 207 QLADLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 266
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 267 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 326
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 327 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 386
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEIL
Sbjct: 387 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEIL 446
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 447 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 506
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSCG 1343
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+CG
Sbjct: 507 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCG 566
Query: 1344 NYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSRE 1517
NYQNK VD +NN+YKY KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSRE
Sbjct: 567 NYQNKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSRE 626
Query: 1518 VPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREI 1697
VP+EVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+GH+SFYREI
Sbjct: 627 VPVEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTVGHVSFYREI 674
Query: 1698 EEAIQGFCRAYS 1733
EEAIQGFCRAYS
Sbjct: 675 EEAIQGFCRAYS 686
>ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
gb|ARO91418.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
Length = 686
Score = 1023 bits (2645), Expect = 0.0
Identities = 507/553 (91%), Positives = 523/553 (94%), Gaps = 2/553 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 143 VYCDFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 202
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLADLDLRII NSLVEWKELG+E +GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 203 EQLADLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 262
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 263 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 322
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 323 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 382
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEI
Sbjct: 383 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEI 442
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 443 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 502
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+C
Sbjct: 503 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNC 562
Query: 1341 GNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSR 1514
GNYQNK VD +NN+YKY KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSR
Sbjct: 563 GNYQNKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSR 622
Query: 1515 EVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYRE 1694
EVP+EVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+GH+SFYRE
Sbjct: 623 EVPVEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTVGHVSFYRE 670
Query: 1695 IEEAIQGFCRAYS 1733
IEEAIQGFC+AYS
Sbjct: 671 IEEAIQGFCQAYS 683
>ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
ref|YP_009335155.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
gb|AHI16740.1| RNA polymerase beta subunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
gb|APO12213.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
Length = 682
Score = 1023 bits (2645), Expect = 0.0
Identities = 505/551 (91%), Positives = 520/551 (94%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARP+ K+PTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIR
Sbjct: 141 VYCDFSFARPVAKRPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 IMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+C
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNC 560
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
GNYQNKTVDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLDQR+IGSREV
Sbjct: 561 GNYQNKTVDNNNYKYTKKKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREV 620
Query: 1521 PIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIE 1700
PIEVQYESLGTYHEIYGHYLI SV KEIRCIYIRTT+GH+SFYREIE
Sbjct: 621 PIEVQYESLGTYHEIYGHYLI------------GGSVKKEIRCIYIRTTIGHVSFYREIE 668
Query: 1701 EAIQGFCRAYS 1733
EA+QGFCRAYS
Sbjct: 669 EAVQGFCRAYS 679
>ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
gb|ATB18549.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
Length = 685
Score = 1023 bits (2644), Expect = 0.0
Identities = 509/550 (92%), Positives = 520/550 (94%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YL+FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 145 YLNFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 204
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 205 QLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 264
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 265 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 324
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 325 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 384
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEIL
Sbjct: 385 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEIL 444
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVMQGH VLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 445 QEVMQGHSVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 504
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSCG 1343
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+CG
Sbjct: 505 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCG 564
Query: 1344 NYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREVP 1523
NYQNK VDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSREVP
Sbjct: 565 NYQNKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP 624
Query: 1524 IEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIEE 1703
IEVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+GH+SFYREIEE
Sbjct: 625 IEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTVGHVSFYREIEE 672
Query: 1704 AIQGFCRAYS 1733
AIQGFCRAYS
Sbjct: 673 AIQGFCRAYS 682
>ref|YP_009334903.1| RNA polymerase beta (chloroplast) [Hesperaloe parviflora]
ref|YP_009335070.1| RNA polymerase beta (chloroplast) [Hesperoyucca whipplei]
gb|APO11961.1| RNA polymerase beta (chloroplast) [Hesperaloe parviflora]
gb|APO12128.1| RNA polymerase beta (chloroplast) [Hesperoyucca whipplei]
Length = 682
Score = 1023 bits (2644), Expect = 0.0
Identities = 505/551 (91%), Positives = 520/551 (94%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARP+ K+PTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIR
Sbjct: 141 VYCDFSFARPVAKRPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 IMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+C
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNC 560
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
GNYQNKTVDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLDQR+IGSREV
Sbjct: 561 GNYQNKTVDNNNYKYTKNKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREV 620
Query: 1521 PIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIE 1700
PIEVQYESLGTYHEIYGHYLI SV KEIRCIYIRTT+GH+SFYREIE
Sbjct: 621 PIEVQYESLGTYHEIYGHYLI------------GGSVKKEIRCIYIRTTIGHVSFYREIE 668
Query: 1701 EAIQGFCRAYS 1733
EA+QGFCRAYS
Sbjct: 669 EAVQGFCRAYS 679
>ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
ref|YP_009236351.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87709.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
gb|AMF84065.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
sibiricum]
Length = 686
Score = 1022 bits (2643), Expect = 0.0
Identities = 508/551 (92%), Positives = 521/551 (94%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+YL+FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 145 VYLNFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 204
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 205 EQLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE 264
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL
Sbjct: 265 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 324
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 325 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 384
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEI
Sbjct: 385 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEI 444
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGH VLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 445 LQEVMQGHSVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 504
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+C
Sbjct: 505 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNC 564
Query: 1341 GNYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREV 1520
GNYQN+ VDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSREV
Sbjct: 565 GNYQNEKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREV 624
Query: 1521 PIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIE 1700
PIEVQYESLGTYHEIYGHYLI V SV KEIRCIYIRTT+GH+SFYREIE
Sbjct: 625 PIEVQYESLGTYHEIYGHYLI------------VGSVKKEIRCIYIRTTVGHVSFYREIE 672
Query: 1701 EAIQGFCRAYS 1733
EAIQGFCRAYS
Sbjct: 673 EAIQGFCRAYS 683
>gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]
Length = 685
Score = 1022 bits (2643), Expect = 0.0
Identities = 508/550 (92%), Positives = 520/550 (94%)
Frame = +3
Query: 84 YLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 263
YL+FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE
Sbjct: 145 YLNFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIRE 204
Query: 264 QLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVEP 443
QLADLDLRII NSLVEWKELG+E S GNEWEDRKI RRKDFLVRR+ELAKHFIRTNVEP
Sbjct: 205 QLADLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEP 264
Query: 444 EWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 623
EWM+LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV
Sbjct: 265 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELV 324
Query: 624 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 803
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 325 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 384
Query: 804 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEIL 983
SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQH+ASNIGIAKSKIREKEPIVWEIL
Sbjct: 385 SVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEIL 444
Query: 984 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 1163
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 445 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 504
Query: 1164 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSCG 1343
SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY+LTIGNRRGIC NRYNPY+CG
Sbjct: 505 SLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCG 564
Query: 1344 NYQNKTVDNNNNDYKYLKEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSREVP 1523
NYQNK VDNNN Y KEPYF SSYDALGAYRQKRI+LDSP WLRWRLD R+IGSREVP
Sbjct: 565 NYQNKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP 624
Query: 1524 IEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYREIEE 1703
IE QYESLGTYHEIYGHYLI V SV K+IRCIYIRTT+GH+SFYREIEE
Sbjct: 625 IEFQYESLGTYHEIYGHYLI------------VGSVKKKIRCIYIRTTVGHVSFYREIEE 672
Query: 1704 AIQGFCRAYS 1733
AIQGFCRAYS
Sbjct: 673 AIQGFCRAYS 682
>gb|AHA12746.1| RNA polymerase beta (plastid) [Canna indica]
Length = 684
Score = 1022 bits (2642), Expect = 0.0
Identities = 511/553 (92%), Positives = 522/553 (94%), Gaps = 2/553 (0%)
Frame = +3
Query: 81 IYLDFSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIR 260
+Y DFSFARP+ KKPTFLRLRGLFEYEIQS KYSIPLFFTTQGFETFRNREISTGAGAIR
Sbjct: 141 VYCDFSFARPVAKKPTFLRLRGLFEYEIQSRKYSIPLFFTTQGFETFRNREISTGAGAIR 200
Query: 261 EQLADLDLRIITGNSLVEWKELGEEGSIGNEWEDRKITRRKDFLVRRIELAKHFIRTNVE 440
EQLAD DLRII GNSLVEWKELGEEGS GNEWED KI RRKDFLVRR+ELAKHFIRTNVE
Sbjct: 201 EQLADSDLRIIIGNSLVEWKELGEEGSTGNEWEDGKIRRRKDFLVRRMELAKHFIRTNVE 260
Query: 441 PEWMILCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL 620
PEWM+LCLLPVLPPELRPII IDGGKLMSSDINELYRRVIYRNNTLTDLLATS STPGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIPIDGGKLMSSDINELYRRVIYRNNTLTDLLATSGSTPGEL 320
Query: 621 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 800
VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 801 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 980
RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEI 440
Query: 981 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 1160
LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP
Sbjct: 441 LQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVP 500
Query: 1161 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICTNRYNPYSC 1340
LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGIC NRYN YSC
Sbjct: 501 LSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNLYSC 560
Query: 1341 GNYQNKTVDNNNNDYKYL--KEPYFSSSYDALGAYRQKRISLDSPLWLRWRLDQRIIGSR 1514
GNYQ KTVDN+NNDY+Y KEPYFSSSYDALGAYRQKRI+LDSPLWLRWRLDQR+IGSR
Sbjct: 561 GNYQKKTVDNDNNDYRYTKQKEPYFSSSYDALGAYRQKRINLDSPLWLRWRLDQRVIGSR 620
Query: 1515 EVPIEVQYESLGTYHEIYGHYLIVESVTKVESVTKVESVTKEIRCIYIRTTLGHISFYRE 1694
EVP+EVQYESLGTYHEIY HYL V S+TKEIRCIYIRTTLGHISFYRE
Sbjct: 621 EVPVEVQYESLGTYHEIYEHYL------------TVGSITKEIRCIYIRTTLGHISFYRE 668
Query: 1695 IEEAIQGFCRAYS 1733
IEEAIQGFCRAYS
Sbjct: 669 IEEAIQGFCRAYS 681