BLASTX nr result

ID: Cheilocostus21_contig00041823 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00041823
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72949.1| E3 ubiquitin-protein ligase HOS1, partial [Musa A...    82   2e-15
ref|XP_009401635.1| PREDICTED: E3 ubiquitin-protein ligase HOS1 ...    73   3e-12

>gb|AFX72949.1| E3 ubiquitin-protein ligase HOS1, partial [Musa AB Group]
          Length = 903

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 47/125 (37%), Positives = 65/125 (52%)
 Frame = -2

Query: 396  TTYPLNGQNQGSDVLNLHDITWQTNYRQAIQPADSQRSMKFHRSSKAKPMKGLSSSETRV 217
            ++YP NG    S+  N+ D+ WQ + +QA QP D   S+KFH  SKAKP  G +SS  RV
Sbjct: 733  SSYPFNGAIPSSNDTNVRDMMWQADMKQAFQPVDGDHSVKFHHGSKAKPTIGPNSSAARV 792

Query: 216  IENDYQFHGETSFTGPFDFSQQAGNHLLAGLTKVTPARVSHNGLSNGSIYDHIQSSGNYD 37
            + N+     ++    P                +VT A  SHNG    S++D IQSS  Y+
Sbjct: 793  LRNE-----KSRLVFP----------------RVTSADHSHNGSRKESVHDPIQSSRRYN 831

Query: 36   QPDGT 22
             PDG+
Sbjct: 832  LPDGS 836


>ref|XP_009401635.1| PREDICTED: E3 ubiquitin-protein ligase HOS1 [Musa acuminata subsp.
            malaccensis]
          Length = 971

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = -2

Query: 396  TTYPLNGQNQGSDVLNLHDITWQTNYRQAIQPADSQRSMKFHRSSKA--KPMKGLSSSET 223
            ++YP NG    S+  N+ ++ WQ + +QA QP D   S+KFH  SKA  KP +G +SS  
Sbjct: 799  SSYPFNGVIPSSNDTNVRNMMWQADMKQAFQPVDGDHSVKFHHGSKAKPKPTRGPNSSAA 858

Query: 222  RVIENDYQFHGETSFTGPFDFSQQAGNHLLAGLTKVTPARVSHNGLSNGSIYDHIQSSGN 43
            RV+ N+                    N  L    +VT A   H+G    S++D IQSS  
Sbjct: 859  RVLRNE--------------------NPRLV-FPRVTSADHCHDGSRKESVHDPIQSSRR 897

Query: 42   YDQPDGT 22
            Y+ PDG+
Sbjct: 898  YNLPDGS 904


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