BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00041815
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposo...   164   1e-44
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   163   1e-43
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   163   3e-43
gb|KYP49849.1| Retrovirus-related Pol polyprotein from transposo...   144   1e-39
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-37
gb|EEE65861.1| hypothetical protein OsJ_21651 [Oryza sativa Japo...   143   4e-37
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   145   5e-37
gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subc...   145   5e-37
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   145   7e-37
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   144   9e-37
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   144   9e-37
gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc...   144   1e-36
dbj|BAB03249.1| polyprotein [Oryza sativa]                            144   1e-36
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     144   1e-36
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   144   1e-36
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   144   1e-36
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   144   1e-36
gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subc...   144   1e-36
gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group]     144   1e-36
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   144   1e-36

>gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 565

 Score =  164 bits (415), Expect = 1e-44
 Identities = 89/170 (52%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           + RM  L LIPKS +   +KCE+CVQAKQPR   ++   KET +LELIHSD+CDSN   T
Sbjct: 37  IKRMMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNGVIT 96

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTYKK-IKILRSDKGGEYT 359
           RG  KYF+TFID+ SK CY               +     +   +K IKILRSD+GGEY+
Sbjct: 97  RGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLEKSIKILRSDRGGEYS 156

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAP 506
           SN+  +F + HGI++ VT PY+ QSNG+A RKN+TLLDM+NA+L+SSG P
Sbjct: 157 SNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLP 206


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  163 bits (412), Expect = 1e-43
 Identities = 88/170 (51%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           + RM  L LIPKS +   +KCE+CVQAKQPR   ++   KET +LELIHSD+CDSN   T
Sbjct: 365 IKRMMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNGVIT 424

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTYKK-IKILRSDKGGEYT 359
           RG  KYF+TFID+ SK CY               +     +   ++ IKILRSD+GGEY+
Sbjct: 425 RGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGGEYS 484

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAP 506
           SN+  +F + HGI++ VT PY+ QSNG+A RKN+TLLDM+NA+L+SSG P
Sbjct: 485 SNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLP 534


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  163 bits (412), Expect = 3e-43
 Identities = 88/170 (51%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           + RM  L LIPKS +   +KCE+CVQAKQPR   ++   KET +LELIHSD+CDSN   T
Sbjct: 367 IKRMMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNGVIT 426

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTYKK-IKILRSDKGGEYT 359
           RG  KYF+TFID+ SK CY               +     +   ++ IKILRSD+GGEY+
Sbjct: 427 RGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGGEYS 486

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAP 506
           SN+  +F + HGI++ VT PY+ QSNG+A RKN+TLLDM+NA+L+SSG P
Sbjct: 487 SNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLP 536


>gb|KYP49849.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score =  144 bits (364), Expect = 1e-39
 Identities = 85/168 (50%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
 Frame = +3

Query: 12  MSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPTRGE 191
           M  L LIPKS +   +KCE+CVQAKQPR   ++   KET LLELIHSD+CD N   TRG 
Sbjct: 1   MITLNLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETWLLELIHSDICDGNGVITRGR 60

Query: 192 SKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTYKK-IKILRSDKGGEYTSND 368
            KYF+TFID+ SK  Y               +     +   +K IKILR D GGEY+SN+
Sbjct: 61  KKYFITFIDDFSKYFYVYLIIHKSELFEKFKVYKEEDENQLEKSIKILRYDTGGEYSSNE 120

Query: 369 FFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAIL-LSSGAP 506
             +F + HGI++ VT PY+ QSNG+A RKN TLLDM+N    LSSG P
Sbjct: 121 MGEFFETHGIIHEVTPPYAPQSNGIAERKNCTLLDMINVTTRLSSGLP 168


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1235

 Score =  145 bits (367), Expect = 4e-37
 Identities = 77/171 (45%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           +SR+S++ LIPK +     KC  CVQ+KQPR  HK++  +    LEL+HSD+C+ N   T
Sbjct: 379 MSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAVEERNLAPLELLHSDLCEMNGVLT 438

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTY-KKIKILRSDKGGEYT 359
           +G  +YF+TFID+ ++ CY               +     K    +KIK LRSD+GGE+ 
Sbjct: 439 KGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVKNQLDRKIKRLRSDRGGEFF 498

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPK 509
           SN+F  FC+EHGI++  T PYS +SNG+A RKN+TL D+VNA+L ++G PK
Sbjct: 499 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTTGLPK 549


>gb|EEE65861.1| hypothetical protein OsJ_21651 [Oryza sativa Japonica Group]
          Length = 525

 Score =  143 bits (361), Expect = 4e-37
 Identities = 79/180 (43%), Positives = 108/180 (60%), Gaps = 10/180 (5%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           ++R++N+ L+PK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 237 MTRLANMSLVPKFTLVKDSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 296

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTYK---------KIKILR 335
           +G  KYF+T ID+C+++CY                       TYK         KIK LR
Sbjct: 297 KGGKKYFMTLIDDCTRVCYVYLLKTKDEALHYFK--------TYKTEVENQLERKIKRLR 348

Query: 336 SDKGGEYTSNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
           SD+GGEY SN+F  FC+E GI++  T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 349 SDRGGEYFSNEFTSFCEEFGIIHERTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 408


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  145 bits (366), Expect = 5e-37
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 174 MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKSHKASEARNLAPLELVHSDLCEMNGVLT 233

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
           +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 234 KGGKKYFITLIDDCTRFCYVYLLKTKDEALHYIKIYKAEVENQLERKIKRLRSDRGGEYF 293

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
           SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 294 SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 345


>gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1297

 Score =  145 bits (366), Expect = 5e-37
 Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 513  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 572

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 573  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYF 632

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKKAI 518
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+ +
Sbjct: 633  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKECV 686


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  145 bits (365), Expect = 7e-37
 Identities = 78/172 (45%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            L+R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 556  LTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 615

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 616  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 675

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 676  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 727


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  144 bits (364), Expect = 9e-37
 Identities = 78/172 (45%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LELIHSD+C+ N   T
Sbjct: 551  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELIHSDLCEMNGVLT 610

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 611  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 670

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 671  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 722


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1479

 Score =  144 bits (364), Expect = 9e-37
 Identities = 78/172 (45%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LELIHSD+C+ N   T
Sbjct: 622  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELIHSDLCEMNGVLT 681

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 682  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 741

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 742  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 793


>gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1186

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 587  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 646

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 647  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYF 706

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 707  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 758


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 411 MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 470

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
           +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 471 KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 530

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
           SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 531 SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 582


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 411 MTRLANMSLIPKFTLVKDSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 470

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
           +G  KYF T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 471 KGGKKYFTTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 530

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
           SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 531 SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 582


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 556  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 615

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 616  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 675

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 676  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 727


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  144 bits (363), Expect = 1e-36
 Identities = 76/171 (44%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
           +SR+S++ LIPK +     KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 407 MSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLT 466

Query: 183 RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*KPTY-KKIKILRSDKGGEYT 359
           +G  +YF+TFID+ ++ CY               +     +    +KIK LRSD+GGE+ 
Sbjct: 467 KGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFF 526

Query: 360 SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPK 509
           SN+F  FC+EHGI++ +T PYS +SNG+A RKN+TL D+VNA+L ++G PK
Sbjct: 527 SNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPK 577


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1298

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 556  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 615

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 616  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 675

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 676  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 727


>gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1361

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 578  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 637

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 638  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYF 697

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 698  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 749


>gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1388

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 574  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASKARNLAPLELVHSDLCEMNGVLT 633

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 634  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYF 693

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 694  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 745


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  144 bits (363), Expect = 1e-36
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3    LSRMSNLGLIPKSNSNPHEKCELCVQAKQPRHHHKSIPHKETELLELIHSDVCDSNQDPT 182
            ++R++N+ LIPK       KC  CVQ+KQPR  HK+   +    LEL+HSD+C+ N   T
Sbjct: 537  MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLT 596

Query: 183  RGESKYFVTFIDNCSKLCYTDXXXXXXXXXXXXNL*S*S*K-PTYKKIKILRSDKGGEYT 359
            +G  KYF+T ID+C++ CY               +     +    +KIK LRSD+GGEY 
Sbjct: 597  KGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYF 656

Query: 360  SNDFFQFCQEHGIVY*VTAPYS-QSNGVA*RKNKTLLDMVNAILLSSGAPKK 512
            SN+F  FC+E GI++ +T PYS QSNGVA RKN+TL +MVNA+L ++G  K+
Sbjct: 657  SNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKE 708