BLASTX nr result
ID: Cheilocostus21_contig00041773
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00041773
(991 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHA13000.1| RNA polymerase beta' subunit (plastid) [Costus pu... 277 1e-80
gb|AHA12914.1| RNA polymerase beta' subunit (plastid) [Monocostu... 270 3e-78
ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia coll... 253 4e-72
gb|AHA12745.1| RNA polymerase beta' subunit (plastid) [Canna ind... 250 3e-71
gb|ANO45675.1| RNA polymerase beta' subunit (chloroplast) [Peter... 249 6e-71
ref|YP_009141940.1| DNA-directed RNA polymerase beta' chain (chl... 248 1e-70
gb|PKU64048.1| DNA-directed RNA polymerase subunit beta'' [Dendr... 224 4e-70
gb|ANO45553.1| RNA polymerase beta' subunit (chloroplast) [Ripog... 247 4e-70
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 247 4e-70
gb|AEZ49489.1| RNA polymerase beta'' subunit, partial (plastid) ... 246 6e-70
gb|AEX94844.1| RNA polymerase beta' subunit (chloroplast) [Xeron... 246 8e-70
gb|AFM83283.1| RNA polymerase beta' subunit (chloroplast) [Kingi... 246 1e-69
gb|ANO45253.1| RNA polymerase beta' subunit (chloroplast) [Lapag... 245 1e-69
gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chiono... 244 4e-69
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha... 244 5e-69
gb|AKR81199.1| RNA polymerase beta' subunit (plastid) [Cyclanthu... 244 5e-69
ref|YP_009141853.1| DNA-directed RNA polymerase beta' chain (chl... 243 7e-69
gb|ANO45614.1| RNA polymerase beta' subunit (chloroplast) [Prosa... 243 1e-68
ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spect... 243 1e-68
ref|YP_009440833.1| RNA polymerase beta' subunit (plastid) [Japo... 242 2e-68
>gb|AHA13000.1| RNA polymerase beta' subunit (plastid) [Costus pulverulentus]
Length = 1377
Score = 277 bits (708), Expect = 1e-80
Identities = 140/142 (98%), Positives = 141/142 (99%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1236 LLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1295
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGFQKL HRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF
Sbjct: 1296 GLKENVVLGGIIPVGTGFQKLAHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 1355
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CSSVPNNFHETSEQSFTRFHNS
Sbjct: 1356 CSSVPNNFHETSEQSFTRFHNS 1377
>gb|AHA12914.1| RNA polymerase beta' subunit (plastid) [Monocostus uniflorus]
Length = 1377
Score = 270 bits (690), Expect = 3e-78
Identities = 138/142 (97%), Positives = 139/142 (97%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1236 LLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1295
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF
Sbjct: 1296 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 1355
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CSSV NNFHETSEQSF RF NS
Sbjct: 1356 CSSVSNNFHETSEQSFMRFQNS 1377
>ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia collinsiana]
gb|AGE92674.1| RNA polymerase beta' subunit (plastid) [Heliconia collinsiana]
Length = 1384
Score = 253 bits (645), Expect = 4e-72
Identities = 133/147 (90%), Positives = 137/147 (93%), Gaps = 5/147 (3%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1242 LLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1301
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKN+YLEIKRKNLFDLEMRDILLHHRELF
Sbjct: 1302 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNIYLEIKRKNLFDLEMRDILLHHRELF 1357
Query: 134 CSSVPN-----NFHETSEQSFTRFHNS 69
CS VPN NFHETSEQSFTRFH+S
Sbjct: 1358 CSYVPNNFHETNFHETSEQSFTRFHDS 1384
>gb|AHA12745.1| RNA polymerase beta' subunit (plastid) [Canna indica]
Length = 1371
Score = 250 bits (638), Expect = 3e-71
Identities = 128/142 (90%), Positives = 135/142 (95%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1234 LLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1293
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGG+IPVGTGF+ LVHR SRQDKN+YLEIK KNLFDLE+RDILLHHRELF
Sbjct: 1294 GLKENVVLGGLIPVGTGFKNLVHR----SRQDKNIYLEIKGKNLFDLEIRDILLHHRELF 1349
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS VPN+FHETSEQSFTRFH+S
Sbjct: 1350 CSYVPNSFHETSEQSFTRFHDS 1371
>gb|ANO45675.1| RNA polymerase beta' subunit (chloroplast) [Petermannia cirrosa]
Length = 1380
Score = 249 bits (636), Expect = 6e-71
Identities = 127/142 (89%), Positives = 134/142 (94%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAISYRA+LLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1243 LLRAERAGRALDEAISYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1302
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKN+YLEIKRKNLF+ EMRDILLHHRELF
Sbjct: 1303 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNIYLEIKRKNLFEFEMRDILLHHRELF 1358
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS P NFHETSEQSFTRF++S
Sbjct: 1359 CSCTPKNFHETSEQSFTRFNDS 1380
>ref|YP_009141940.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Heloniopsis
tubiflora]
gb|AIW56494.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Heloniopsis
tubiflora]
Length = 1385
Score = 248 bits (634), Expect = 1e-70
Identities = 127/141 (90%), Positives = 134/141 (95%)
Frame = -3
Query: 491 LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG 312
LRAERAGRALDEAISYRAILLGITR SLNTQSFISEASFQETARVLAKAALRGRIDWLKG
Sbjct: 1249 LRAERAGRALDEAISYRAILLGITRTSLNTQSFISEASFQETARVLAKAALRGRIDWLKG 1308
Query: 311 LKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELFC 132
LKENVVLGGIIPVGTGF+KLVH +SRQDKN+YLEIKRKNLF+LE+RDILLHHRELFC
Sbjct: 1309 LKENVVLGGIIPVGTGFKKLVH----NSRQDKNIYLEIKRKNLFELEIRDILLHHRELFC 1364
Query: 131 SSVPNNFHETSEQSFTRFHNS 69
S PNNFHETSEQSFTRF++S
Sbjct: 1365 SCAPNNFHETSEQSFTRFNDS 1385
>gb|PKU64048.1| DNA-directed RNA polymerase subunit beta'' [Dendrobium catenatum]
Length = 150
Score = 224 bits (571), Expect = 4e-70
Identities = 117/142 (82%), Positives = 127/142 (89%), Gaps = 5/142 (3%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGR LDEAI YRAILLGIT++SLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 13 LLRAERAGRVLDEAICYRAILLGITKSSLNTQSFISEASFQETARVLAKAALRGRIDWLK 72
Query: 314 GLKENVVLG-----GIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLH 150
GLKENVVLG GIIPVGTGF+KLVHR S+QDKN++L+IKRKNLF+LEM DILLH
Sbjct: 73 GLKENVVLGGGGVRGIIPVGTGFKKLVHR----SKQDKNIHLKIKRKNLFELEMGDILLH 128
Query: 149 HRELFCSSVPNNFHETSEQSFT 84
HRELFCS PN FHETS+QSFT
Sbjct: 129 HRELFCSCAPNTFHETSDQSFT 150
>gb|ANO45553.1| RNA polymerase beta' subunit (chloroplast) [Ripogonum album]
Length = 1381
Score = 247 bits (630), Expect = 4e-70
Identities = 127/142 (89%), Positives = 134/142 (94%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI+YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1244 LLRAERAGRALDEAINYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1303
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVH SRQDKN+YLEIKRKNLFDLEM DILL+HRELF
Sbjct: 1304 GLKENVVLGGIIPVGTGFKKLVHH----SRQDKNIYLEIKRKNLFDLEMGDILLYHRELF 1359
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS PNNFHETSEQSFTRF++S
Sbjct: 1360 CSCAPNNFHETSEQSFTRFNDS 1381
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 247 bits (630), Expect = 4e-70
Identities = 125/142 (88%), Positives = 133/142 (93%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1250 LLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1309
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKN++LEIK+KNLF+LEMRDILLHHRE F
Sbjct: 1310 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNIHLEIKKKNLFELEMRDILLHHREFF 1365
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS PNNFH+T E+SFTRFHNS
Sbjct: 1366 CSCAPNNFHDTPEKSFTRFHNS 1387
>gb|AEZ49489.1| RNA polymerase beta'' subunit, partial (plastid) [Neoastelia
spectabilis]
Length = 1385
Score = 246 bits (629), Expect = 6e-70
Identities = 126/142 (88%), Positives = 132/142 (92%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI YRAILLGIT+ASLNTQSFISEASFQET RVLAKAALRGRIDWLK
Sbjct: 1248 LLRAERAGRALDEAICYRAILLGITKASLNTQSFISEASFQETTRVLAKAALRGRIDWLK 1307
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGFQKLVHR SRQDKN++LEIKRKNLF+LE+RDILLHH E F
Sbjct: 1308 GLKENVVLGGIIPVGTGFQKLVHR----SRQDKNIHLEIKRKNLFELEIRDILLHHIEFF 1363
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS VPNNFHET EQSFTRFHNS
Sbjct: 1364 CSCVPNNFHETPEQSFTRFHNS 1385
>gb|AEX94844.1| RNA polymerase beta' subunit (chloroplast) [Xeronema callistemon]
Length = 1382
Score = 246 bits (628), Expect = 8e-70
Identities = 125/142 (88%), Positives = 133/142 (93%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDE+I YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1245 LLRAERAGRALDESICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1304
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKN++LEIK+KNLF+LEMRDILLHHRE F
Sbjct: 1305 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNIHLEIKKKNLFELEMRDILLHHREFF 1360
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS VPNNFHE E+SFTRFHNS
Sbjct: 1361 CSCVPNNFHEIPEKSFTRFHNS 1382
>gb|AFM83283.1| RNA polymerase beta' subunit (chloroplast) [Kingia australis]
Length = 1385
Score = 246 bits (627), Expect = 1e-69
Identities = 126/140 (90%), Positives = 133/140 (95%)
Frame = -3
Query: 491 LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG 312
LRAERAGRALDEAI YRA+LLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG
Sbjct: 1249 LRAERAGRALDEAICYRAMLLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG 1308
Query: 311 LKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELFC 132
LKENVVLGGIIPVGTGFQKLVHR SRQDKN++LEIKRKNLF+L+MRDILLHHRELFC
Sbjct: 1309 LKENVVLGGIIPVGTGFQKLVHR----SRQDKNIHLEIKRKNLFELQMRDILLHHRELFC 1364
Query: 131 SSVPNNFHETSEQSFTRFHN 72
S V NNFHETSEQSFTRF++
Sbjct: 1365 SDVSNNFHETSEQSFTRFND 1384
>gb|ANO45253.1| RNA polymerase beta' subunit (chloroplast) [Lapageria rosea]
Length = 1381
Score = 245 bits (626), Expect = 1e-69
Identities = 126/142 (88%), Positives = 134/142 (94%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI+YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1244 LLRAERAGRALDEAINYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1303
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVH SRQDKN+YLEIKRKNLF+LEM DILL+HRELF
Sbjct: 1304 GLKENVVLGGIIPVGTGFKKLVHH----SRQDKNIYLEIKRKNLFELEMGDILLYHRELF 1359
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS PNNFHETSEQSFTRF++S
Sbjct: 1360 CSCAPNNFHETSEQSFTRFNDS 1381
>gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chionographis japonica]
Length = 1382
Score = 244 bits (623), Expect = 4e-69
Identities = 125/141 (88%), Positives = 132/141 (93%)
Frame = -3
Query: 491 LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG 312
LRAERAGRALDEAI YRAILLGITR SLNTQSFISEASFQETARVL+KAALRGRIDWLKG
Sbjct: 1246 LRAERAGRALDEAIGYRAILLGITRTSLNTQSFISEASFQETARVLSKAALRGRIDWLKG 1305
Query: 311 LKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELFC 132
LKENVVLGGIIPVGTGF+KLVH +SRQDKN+YLEIKRKNLF+LEMRDILLHHRELFC
Sbjct: 1306 LKENVVLGGIIPVGTGFKKLVH----NSRQDKNIYLEIKRKNLFELEMRDILLHHRELFC 1361
Query: 131 SSVPNNFHETSEQSFTRFHNS 69
S NNFHETSEQSFTRF++S
Sbjct: 1362 SCAQNNFHETSEQSFTRFNDS 1382
>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
Length = 1343
Score = 244 bits (622), Expect = 5e-69
Identities = 124/142 (87%), Positives = 132/142 (92%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1206 LLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1265
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKN++LEIK+KNLF+LEMRDILLHHRE F
Sbjct: 1266 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNIHLEIKKKNLFELEMRDILLHHREFF 1321
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS NNFH+T E+SFTRFHNS
Sbjct: 1322 CSCAQNNFHDTPEKSFTRFHNS 1343
>gb|AKR81199.1| RNA polymerase beta' subunit (plastid) [Cyclanthus bipartitus]
Length = 1378
Score = 244 bits (622), Expect = 5e-69
Identities = 126/142 (88%), Positives = 134/142 (94%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGR LDEAI YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1241 LLRAERAGRVLDEAIYYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1300
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVHR SRQDKNV+LEIK+K LF+LEMRDILLHHRELF
Sbjct: 1301 GLKENVVLGGIIPVGTGFKKLVHR----SRQDKNVHLEIKKKTLFELEMRDILLHHRELF 1356
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS VPNNF+ETSEQSFTRF++S
Sbjct: 1357 CSCVPNNFYETSEQSFTRFNDS 1378
>ref|YP_009141853.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Xerophyllum
tenax]
gb|AIW56407.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Xerophyllum
tenax]
Length = 1380
Score = 243 bits (621), Expect = 7e-69
Identities = 125/141 (88%), Positives = 130/141 (92%)
Frame = -3
Query: 491 LRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKG 312
LRA RAGRALDEAI YRAILLGITR SLNTQSFISEASFQETARVLAKAALRGRIDWLKG
Sbjct: 1244 LRAARAGRALDEAIGYRAILLGITRTSLNTQSFISEASFQETARVLAKAALRGRIDWLKG 1303
Query: 311 LKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELFC 132
LKENVVLGGIIPVGTGF+KLVH SRQDKN+YLEIKRKNLF+ EMRDILLHHRELFC
Sbjct: 1304 LKENVVLGGIIPVGTGFKKLVHH----SRQDKNIYLEIKRKNLFESEMRDILLHHRELFC 1359
Query: 131 SSVPNNFHETSEQSFTRFHNS 69
S PNNFHETSEQSFTRF++S
Sbjct: 1360 SCAPNNFHETSEQSFTRFNDS 1380
>gb|ANO45614.1| RNA polymerase beta' subunit (chloroplast) [Prosartes lanuginosa]
Length = 1376
Score = 243 bits (619), Expect = 1e-68
Identities = 125/142 (88%), Positives = 133/142 (93%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGRALDEAI+YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1239 LLRAERAGRALDEAINYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1298
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVH SRQDKN YLEIKRKNLF+LEM DILL+HRELF
Sbjct: 1299 GLKENVVLGGIIPVGTGFKKLVHH----SRQDKNFYLEIKRKNLFELEMGDILLYHRELF 1354
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS PNNFHETS+QSFTRF++S
Sbjct: 1355 CSCAPNNFHETSQQSFTRFNDS 1376
>ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spectabile]
gb|AGE92759.1| RNA polymerase beta' subunit (plastid) [Zingiber spectabile]
Length = 1380
Score = 243 bits (619), Expect = 1e-68
Identities = 124/142 (87%), Positives = 131/142 (92%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAER GRALDEAISYRAILLGITR SLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1243 LLRAERVGRALDEAISYRAILLGITRTSLNTQSFISEASFQETARVLAKAALRGRIDWLK 1302
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF+KLVH S +DKN YLEIKRKNLFDLE++D+LLHHRELF
Sbjct: 1303 GLKENVVLGGIIPVGTGFKKLVHH----SSKDKNFYLEIKRKNLFDLEIKDLLLHHRELF 1358
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS VPNNFHET EQSFTRFH+S
Sbjct: 1359 CSYVPNNFHETLEQSFTRFHDS 1380
>ref|YP_009440833.1| RNA polymerase beta' subunit (plastid) [Japonolirion osense]
gb|AHH24323.1| RNA polymerase beta' subunit (chloroplast) [Japonolirion osense]
emb|CUS18787.1| RNA polymerase beta' subunit (plastid) [Japonolirion osense]
Length = 1374
Score = 242 bits (618), Expect = 2e-68
Identities = 123/142 (86%), Positives = 132/142 (92%)
Frame = -3
Query: 494 VLRAERAGRALDEAISYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 315
+LRAERAGR LDEAI YRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK
Sbjct: 1237 LLRAERAGRVLDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLK 1296
Query: 314 GLKENVVLGGIIPVGTGFQKLVHRSRQDSRQDKNVYLEIKRKNLFDLEMRDILLHHRELF 135
GLKENVVLGGIIPVGTGF KLVHR SRQDKN++LEIK+KNLF++EMRDIL HHRELF
Sbjct: 1297 GLKENVVLGGIIPVGTGFTKLVHR----SRQDKNIHLEIKKKNLFEVEMRDILFHHRELF 1352
Query: 134 CSSVPNNFHETSEQSFTRFHNS 69
CS +PNNFHE SEQSFTRF++S
Sbjct: 1353 CSCIPNNFHEPSEQSFTRFNDS 1374