BLASTX nr result

ID: Cheilocostus21_contig00041606 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00041606
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA60010.1| putative membrane protein [Apostasia shenzhenica]       55   2e-06
ref|XP_009401785.1| PREDICTED: uncharacterized membrane protein ...    56   3e-06

>gb|PKA60010.1| putative membrane protein [Apostasia shenzhenica]
          Length = 213

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 23/36 (63%), Positives = 32/36 (88%)
 Frame = +2

Query: 338 FIWNVVAYRRSLAIHLFLDRFPHTDLLTTNDGQLVK 445
           F+WN +++RR++AI LF+DRFP +DLLT +DGQLVK
Sbjct: 64  FLWNSLSFRRNIAIFLFVDRFPASDLLTASDGQLVK 99


>ref|XP_009401785.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Musa
           acuminata subsp. malaccensis]
 ref|XP_018681238.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Musa
           acuminata subsp. malaccensis]
 ref|XP_018681239.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Musa
           acuminata subsp. malaccensis]
          Length = 289

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +2

Query: 338 FIWNVVAYRRSLAIHLFLDRFPHTDLLTTNDGQLVK 445
           F+WN  AYRR L++ LFLDRFP TDLL+  D QLVK
Sbjct: 65  FLWNAAAYRRKLSLDLFLDRFPDTDLLSAKDSQLVK 100


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