BLASTX nr result

ID: Cheilocostus21_contig00041578 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00041578
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009404188.1| PREDICTED: serine/threonine-protein kinase p...    59   6e-07
ref|XP_009408241.1| PREDICTED: serine/threonine-protein kinase p...    57   2e-06

>ref|XP_009404188.1| PREDICTED: serine/threonine-protein kinase prpf4B [Musa acuminata
           subsp. malaccensis]
          Length = 1049

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
 Frame = -1

Query: 442 KIDVFKTSAGSDAETGKANCD------DMIMHGVEDTMRWKELREGG------DSDGYTF 299
           K+D F T   SD+ +G+   D      ++I+ GV+D+     L          D      
Sbjct: 96  KVDGFVTDGVSDSGSGEIKPDGVDVYSNLIVPGVKDSSGKNVLVLSNKQNTLKDEKMLDL 155

Query: 298 GQQADNSSKRPAE--EEIISHGAD----RQKLSKSSKKNEDKQMDMDRNNSKHRTRSRSP 137
               +NSS       E   S G +     + ++KS + N++KQM  DRN+S+ + RSRSP
Sbjct: 156 AWSCENSSLNDTAWMEVDTSDGENCVWKAESITKSLELNDNKQMQTDRNDSESQVRSRSP 215

Query: 136 VSKENFNLLNHREKDNCENRASDSDSKMLGSRQNRESTGDGQR 8
           VSKE+ +    R   +   + SDSDS  + S+Q  ES    +R
Sbjct: 216 VSKESSHAAKDRMSYDHVKKTSDSDSDKVDSKQYMESKDANRR 258


>ref|XP_009408241.1| PREDICTED: serine/threonine-protein kinase prpf4B [Musa acuminata
           subsp. malaccensis]
          Length = 1080

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/108 (37%), Positives = 56/108 (51%)
 Frame = -1

Query: 325 GGDSDGYTFGQQADNSSKRPAEEEIISHGADRQKLSKSSKKNEDKQMDMDRNNSKHRTRS 146
           G  SDG TF ++A+N S     ++ +  G       + S++NE K    DRN+ K R RS
Sbjct: 161 GDISDGDTFIREAENLSPSDVVKKTVIQGETILCQLELSEQNEIKHKHTDRNDIKIRVRS 220

Query: 145 RSPVSKENFNLLNHREKDNCENRASDSDSKMLGSRQNRESTGDGQRQS 2
           RSP   E      HR++D  E+R S S S+ L S+Q  ES    +R S
Sbjct: 221 RSP--GERSPAAKHRKRDGPEDRDSGSVSERLDSKQYPESRDSSRRAS 266


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