BLASTX nr result

ID: Cheilocostus21_contig00041383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00041383
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009421324.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-11

>ref|XP_009421324.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 1005

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 40/93 (43%), Positives = 48/93 (51%)
 Frame = -3

Query: 282 MLTRWWGCRRRPFHALXXXXXXXXXXXXXXXPTCSPKYVNHLLRSCKDAXXXXXXXXXXX 103
           M  R W CRRRPFH L                T   K++NHLLRSC+D            
Sbjct: 1   MFMRGWRCRRRPFHVLVPVAASPANP------TSPSKHLNHLLRSCRDVRSLLQLHSRIL 54

Query: 102 XXXXLSDEASLAQLINSYSSFHLSDAALAVFNS 4
               L+D+A+   L+NSYSSF  SDAALAVFN+
Sbjct: 55  VLGSLADDATCILLLNSYSSFRRSDAALAVFNT 87


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