BLASTX nr result
ID: Cheilocostus21_contig00041344
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00041344
(863 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|... 77 6e-12
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus] 76 1e-11
gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 71 7e-10
gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 71 7e-10
gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 71 7e-10
gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 70 1e-09
gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 70 1e-09
gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 70 1e-09
gb|ASM61441.1| polyprotein, partial [Cacao swollen shoot virus] 67 3e-09
gb|ASM61440.1| polyprotein, partial [Cacao swollen shoot virus] 67 3e-09
gb|ASM61434.1| polyprotein, partial [Cacao swollen shoot virus] ... 67 3e-09
gb|ASM61436.1| polyprotein, partial [Cacao swollen shoot virus] 67 3e-09
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus] 69 4e-09
gb|ATZ69454.1| ORF3 polyprotein [Cacao swollen shoot CD virus] 68 7e-09
gb|ALQ52676.1| polyprotein, partial [Fig badnavirus 1] 64 8e-09
gb|AUM57178.1| polyprotein, partial [Fig badnavirus 1] >gi|13210... 64 1e-08
gb|AUM57177.1| polyprotein, partial [Fig badnavirus 1] >gi|13210... 64 1e-08
gb|AOX12019.1| polyprotein, partial [Fig badnavirus 1] 64 1e-08
gb|AOX12011.1| polyprotein, partial [Fig badnavirus 1] 64 1e-08
gb|AOX12010.1| polyprotein, partial [Fig badnavirus 1] >gi|10825... 64 1e-08
>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 77.0 bits (188), Expect = 6e-12
Identities = 41/90 (45%), Positives = 52/90 (57%)
Frame = +1
Query: 199 AKARMARTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXX 378
A+ ++ + +R PL EDQIR YR +RRLHNA+Q + R+ R+ G S T
Sbjct: 9 ARTQVQPSTSRTTPLFEDQIRNYRQRERRLHNARQVVGRLHRRITGRSQLHNQTLEQQID 68
Query: 379 XXXXXXXSMRERAAIAPA*VLYHSRRDDAH 468
SM+ERAAI PA VLYHSR DD H
Sbjct: 69 PQVHLRNSMQERAAIVPAEVLYHSRCDDEH 98
>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 75.9 bits (185), Expect = 1e-11
Identities = 41/90 (45%), Positives = 52/90 (57%)
Frame = +1
Query: 199 AKARMARTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXX 378
A+ + + +R PL EDQIR YR QRRL+NA+Q + R+ R+ G S T
Sbjct: 9 ARTQDQPSTSRTTPLFEDQIRNYRQRQRRLNNARQVVGRLQRRITGRSQLHNQTLEQQID 68
Query: 379 XXXXXXXSMRERAAIAPA*VLYHSRRDDAH 468
SM+ERAAI PA V+YHSRRDD H
Sbjct: 69 PQVQLRNSMQERAAIIPAEVMYHSRRDDEH 98
>gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 70.9 bits (172), Expect = 7e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P +DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 70.9 bits (172), Expect = 7e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P +DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 70.9 bits (172), Expect = 7e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P +DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 70.1 bits (170), Expect = 1e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 70.1 bits (170), Expect = 1e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1839
Score = 70.1 bits (170), Expect = 1e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +1
Query: 217 RTETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXX 396
R E P DQIR YR NQRR +N Q++ RR+ RL G + + T
Sbjct: 17 RNEEASGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTGQPY--ERTLEQEIDPQATLR 74
Query: 397 XSMRERAAIAPA*VLYHSRRDDAH 468
SMRERA + PA VLYHSR D AH
Sbjct: 75 MSMRERARLVPAEVLYHSREDSAH 98
>gb|ASM61441.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 241
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 223 ETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXS 402
E + PL EDQ+R+YR NQRRL N ++ RR L G+ Q T S
Sbjct: 18 EQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQETLEQEIDPQVTLRLS 77
Query: 403 MRERAAIAPA*VLYHSRRDDAH 468
M+ERA + PA VLY SRRD H
Sbjct: 78 MQERARLVPAEVLYRSRRDTVH 99
>gb|ASM61440.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 241
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 223 ETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXS 402
E + PL EDQ+R+YR NQRRL N ++ RR L G+ Q T S
Sbjct: 18 EQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQETLEQEIDPQVILRLS 77
Query: 403 MRERAAIAPA*VLYHSRRDDAH 468
M+ERA + PA VLY SRRD H
Sbjct: 78 MQERARLVPAEVLYRSRRDTVH 99
>gb|ASM61434.1| polyprotein, partial [Cacao swollen shoot virus]
gb|ASM61435.1| polyprotein, partial [Cacao swollen shoot virus]
gb|ASM61437.1| polyprotein, partial [Cacao swollen shoot virus]
gb|ASM61442.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 241
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 223 ETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXS 402
E + PL EDQ+R+YR NQRRL N ++ RR L G+ Q T S
Sbjct: 18 EQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQETLEQEIDPQVTLRLS 77
Query: 403 MRERAAIAPA*VLYHSRRDDAH 468
M+ERA + PA VLY SRRD H
Sbjct: 78 MQERARLVPAEVLYRSRRDTVH 99
>gb|ASM61436.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 241
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 223 ETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXS 402
E + PL EDQ+R+YR NQRRL N ++ RR L G+ Q T S
Sbjct: 18 EQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQETLEQEIDPQVTLRLS 77
Query: 403 MRERAAIAPA*VLYHSRRDDAH 468
M+ERA + PA VLY SRRD H
Sbjct: 78 MQERARLVPAEVLYRSRRDTVH 99
>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
Length = 1881
Score = 68.6 bits (166), Expect = 4e-09
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Frame = +1
Query: 211 MARTETRQE---------------PLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSF 345
M+RT+T QE PL EDQ+R+YR NQRRL N Q+A RR+ + G +
Sbjct: 1 MSRTQTVQENPSVTDGRGRQRDNTPLFEDQVRDYRQNQRRLFNLQRATRRLRGSVTGRRY 60
Query: 346 SSQNTXXXXXXXXXXXXXSMRERAAIAPA*VLYHSRRDDAH 468
Q+T SM+ERA + PA VLY SRRD H
Sbjct: 61 --QDTLEQEVDPQAALRLSMQERARLVPAEVLYRSRRDTVH 99
>gb|ATZ69454.1| ORF3 polyprotein [Cacao swollen shoot CD virus]
Length = 1888
Score = 67.8 bits (164), Expect = 7e-09
Identities = 37/82 (45%), Positives = 44/82 (53%)
Frame = +1
Query: 223 ETRQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXS 402
E R+ PL EDQIR+YR QRRL N ++ RR L G+ Q T S
Sbjct: 18 EQREGPLFEDQIRDYRRGQRRLFNLRKKARRAHRALTGSRSRHQETLEQEIDPQTTLRLS 77
Query: 403 MRERAAIAPA*VLYHSRRDDAH 468
M+ERA + PA VLY SRRD H
Sbjct: 78 MQERARLVPAEVLYRSRRDTVH 99
>gb|ALQ52676.1| polyprotein, partial [Fig badnavirus 1]
Length = 144
Score = 63.5 bits (153), Expect = 8e-09
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 2 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 59
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 60 ERANLVPAEVLYRSRRDN 77
>gb|AUM57178.1| polyprotein, partial [Fig badnavirus 1]
gb|AUM57180.1| polyprotein, partial [Fig badnavirus 1]
Length = 150
Score = 63.5 bits (153), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 1 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 58
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 59 ERANLVPAEVLYRSRRDN 76
>gb|AUM57177.1| polyprotein, partial [Fig badnavirus 1]
gb|AUM57179.1| polyprotein, partial [Fig badnavirus 1]
gb|AUM57181.1| polyprotein, partial [Fig badnavirus 1]
gb|AUM57182.1| polyprotein, partial [Fig badnavirus 1]
Length = 150
Score = 63.5 bits (153), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 1 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 58
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 59 ERANLVPAEVLYRSRRDN 76
>gb|AOX12019.1| polyprotein, partial [Fig badnavirus 1]
Length = 158
Score = 63.5 bits (153), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 9 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 66
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 67 ERANLVPAEVLYRSRRDN 84
>gb|AOX12011.1| polyprotein, partial [Fig badnavirus 1]
Length = 158
Score = 63.5 bits (153), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 9 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 66
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 67 ERANLVPAEVLYRSRRDN 84
>gb|AOX12010.1| polyprotein, partial [Fig badnavirus 1]
gb|AOX12012.1| polyprotein, partial [Fig badnavirus 1]
Length = 158
Score = 63.5 bits (153), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 229 RQEPLIEDQIREYRTNQRRLHNAQQALRRVGSRLVGNSFSSQNTXXXXXXXXXXXXXSMR 408
R +PL EDQIR+YR NQRR A+QA+RR R+ G ++ T SM+
Sbjct: 9 RDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN--QTLEQIVDPEVELNQSMQ 66
Query: 409 ERAAIAPA*VLYHSRRDD 462
ERA + PA VLY SRRD+
Sbjct: 67 ERANLVPAEVLYRSRRDN 84