BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040947
         (763 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ37611.1| putative reverse transcriptase zinc-binding domai...    57   8e-06

>gb|PRQ37611.1| putative reverse transcriptase zinc-binding domain-containing
           protein [Rosa chinensis]
          Length = 308

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = +3

Query: 417 VGKLCWLYTMPKIKIFGWKLLQGKLPTLDLLRKMKLWNTAICTLCNREEESATQIF 584
           + KL  L   PKIKIFGW LL+G+L T D L +  + N   C LCNR+ E+A  +F
Sbjct: 233 INKLWKLNVQPKIKIFGWLLLRGRLKTRDRLSRFGIINDNSCLLCNRDNETADHLF 288