BLASTX nr result

ID: Cheilocostus21_contig00040878 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040878
         (1542 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021901808.1| transcription factor-like protein DPB [Caric...    59   6e-06
gb|PHT43461.1| Transcription factor Dp-1 [Capsicum baccatum]           58   8e-06
ref|XP_012704658.1| transcription factor-like protein DPB isofor...    59   1e-05

>ref|XP_021901808.1| transcription factor-like protein DPB [Carica papaya]
          Length = 266

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   GLQNLVQ*NEQLYGSGQVPSGGVALPFILVQVSLLCFTF 117
           GLQNL+Q NEQLY S   PSGGVALPFILVQV+ L ++F
Sbjct: 224 GLQNLIQRNEQLYSSENAPSGGVALPFILVQVNFLIYSF 262


>gb|PHT43461.1| Transcription factor Dp-1 [Capsicum baccatum]
          Length = 208

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   GLQNLVQ*NEQLYGSGQVPSGGVALPFILVQVS 99
           GLQNL++ NEQLYGSG  PSGGVALPFILVQV+
Sbjct: 165 GLQNLIKRNEQLYGSGNAPSGGVALPFILVQVN 197


>ref|XP_012704658.1| transcription factor-like protein DPB isoform X1 [Setaria italica]
          Length = 387

 Score = 59.3 bits (142), Expect = 1e-05
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   GLQNLVQ*NEQLYGSGQVPSGGVALPFILVQVS 99
           GLQNL+Q NEQLYGSG  PSGGVALPFILVQV+
Sbjct: 252 GLQNLIQRNEQLYGSGNTPSGGVALPFILVQVN 284


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