BLASTX nr result

ID: Cheilocostus21_contig00040860 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040860
         (598 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009415543.1| PREDICTED: transcription factor bHLH49-like ...    59   7e-07

>ref|XP_009415543.1| PREDICTED: transcription factor bHLH49-like [Musa acuminata subsp.
           malaccensis]
          Length = 414

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 40/98 (40%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
 Frame = +1

Query: 379 MDLGERDKISSEKIEDHVSYANAGFPV------------------SIADSLNPSLWNPSM 504
           MD+ ERD+ SSEK E H++Y+NAGF                    S+ DS NPSLW    
Sbjct: 1   MDMNERDECSSEKNEHHLTYSNAGFSSGWQFRNPSVGIVPGDQRGSMEDSFNPSLWK--- 57

Query: 505 SSANLGLGEGDITAIDKSTPA-------WNPSDSFSRG 597
                 L E D+ AI K  PA       W PSDS SRG
Sbjct: 58  ------LCESDMPAIAKPVPATSRFDDGWTPSDSSSRG 89


Top