BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040675
         (503 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA07431.1| Ribonuclease H domain [Macleaya cordata]                56   4e-06
gb|PON49491.1| Ribonuclease H-like domain containing protein [Tr...    55   6e-06

>gb|OVA07431.1| Ribonuclease H domain [Macleaya cordata]
          Length = 301

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
 Frame = -1

Query: 443 RLALLDFHDVKSCLLCEGKYF*NKGVTSYQWINPPLGWMKI--------------IGYLI 306
           ++     H V S  +   KY       S +W +P + W KI               G +I
Sbjct: 115 KIPTFQHHQVSSTTVKFPKY-----PESIKWRSPQVNWWKINTDGASRGNPGAAGAGAII 169

Query: 305 RNSTGMCCFVVAAHICTTSALNAELMSIRSALQYVNSSQDSLGTNFSFESECKNVVALIK 126
           R+  G C  V+AA I  TS+L+AE  ++  A+ ++   +     N   ES+   +V  I 
Sbjct: 170 RDYEGKCKIVMAAPIGYTSSLSAETWALYLAITHITPREID---NIWIESDSTQLVGFI- 225

Query: 125 NRNHHQPGDAQYLLPEIYFFLDRIDNCSFSFVHREANQAAN 3
           NR+   P   Q ++ +I   + + ++C  + +HR+ NQAA+
Sbjct: 226 NRDTSPPPYLQGMILDIQANIGKFNSCRVTHIHRQGNQAAD 266


>gb|PON49491.1| Ribonuclease H-like domain containing protein [Trema orientalis]
          Length = 243

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
 Frame = -1

Query: 500 RARNSYVFNGLKLVITDISRLALLDFHDVKSCLLCEGKYF*NKGVTSYQWINPPLGWMKI 321
           RARN  VF+     +  I       F +     LCE      + + + +W+ PP GW+K+
Sbjct: 41  RARNDIVFDSKPFDLFGIHNRIQTQFSE----FLCEQGKNEGRLIRNLKWLPPPAGWLKV 96

Query: 320 -IGYLIRNSTGMCC--------FVVAAHICTTSALNAELMSIRSALQYVNSSQDSLGTNF 168
                +R+S G+C         F++AA+   T+  +  L  I + L+ +    D      
Sbjct: 97  NTDVCMRDSGGVCTAIVRDSSGFILAAYARPTTFFDPLLAEIAAFLEGIRLVLDLGMDTV 156

Query: 167 SFESECKNVVALIKNRNHHQPGDAQYLLPEIYFFLDRIDNCSFSFVHREANQAAN 3
            FE +C+ +   IK+ +     DA+ +L +    L ++       V REAN+ A+
Sbjct: 157 VFEGDCEVIANSIKSTSEELNWDARSMLMDCKALLQQLQVWEVCSVPREANKTAH 211