BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040457
         (1119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   450   e-141
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   445   e-139
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   439   e-137
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   438   e-137
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         437   e-136
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         437   e-136
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         436   e-136
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         435   e-135
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]      398   e-135
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         431   e-134
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]                    404   e-134
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]     401   e-133
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                     414   e-127
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                408   e-126
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...   407   e-126
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   402   e-125
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               406   e-125
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               404   e-124
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]                     404   e-124
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169...   403   e-124

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  450 bits (1158), Expect = e-141
 Identities = 213/318 (66%), Positives = 258/318 (81%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            +F+G+NS  TA+KKLKGGRM IG+N FRIPYTYSF + + D +QMI+GCNF++AM GGVR
Sbjct: 1111 RFSGVNSTMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMYGGVR 1170

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-IKEAVFYNLEVSRKSFVNKFSP 727
            IEGN VTFYKNLTVINT                     I+EAV+ N+  SR+SF+ +F  
Sbjct: 1171 IEGNVVTFYKNLTVINTSQSTEIARMLQEDVDDEELWQIQEAVYINIGKSRESFLKRFEA 1230

Query: 726  LIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQAL 547
            LI QL+EAG+IGE+PL+HW +N+VVCQLDI NPDF + DKPLKH+TP ++++ +RH +AL
Sbjct: 1231 LINQLKEAGYIGENPLQHWEKNRVVCQLDIKNPDFIIEDKPLKHLTPSMKESFRRHTEAL 1290

Query: 546  LDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPG 367
            L + VIRPSKSRHRTTA+IV S T +DP TG E +GKER+VFNYKRLND+TNKDQYSLPG
Sbjct: 1291 LKLGVIRPSKSRHRTTAMIVQSGTAVDPVTGKETRGKERMVFNYKRLNDLTNKDQYSLPG 1350

Query: 366  ISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVV 187
            IS+I+KKVGNSRIYSKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP V
Sbjct: 1351 ISTIMKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPAV 1410

Query: 186  FQRKMDNCFRGAEEFIAL 133
            FQRKMD+CF+G E+FIA+
Sbjct: 1411 FQRKMDHCFKGTEDFIAV 1428


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  445 bits (1145), Expect = e-139
 Identities = 207/317 (65%), Positives = 256/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N+FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1095 QLNGVNSVQKTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1154

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    I++ V  N+  SR+SF+ KF PL
Sbjct: 1155 IEGNEVTFYKNLTKISTSPEVSVNVLEEEVCEEEYLQIQDMVVCNIGESRESFLKKFKPL 1214

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            I++ +EAG+IGE+PL+HW +N V+CQLDI NPDF + D+PLK VTPQ++++ KRH++ALL
Sbjct: 1215 IEEFQEAGYIGENPLQHWEKNGVLCQLDIKNPDFIIEDRPLKSVTPQMKESFKRHVKALL 1274

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+KVIRPSKSRHRTTA++VNS TT+DP+TG E KGKER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1275 DLKVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDITHKDQYSLPGI 1334

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+K++GNS+I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP +F
Sbjct: 1335 NTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSIF 1394

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF G EEFIA+
Sbjct: 1395 QRKMDECFNGTEEFIAV 1411


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  439 bits (1129), Expect = e-137
 Identities = 205/317 (64%), Positives = 255/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SRKSF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRKSFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++TPQ++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+K KER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS+I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  438 bits (1126), Expect = e-137
 Identities = 205/318 (64%), Positives = 257/318 (80%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N+FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1131 QLNGVNSVQKTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1190

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-IKEAVFYNLEVSRKSFVNKFSP 727
            IEGN VTFYKNLT I+T                     ++E V  N+  SR+SF+ +F P
Sbjct: 1191 IEGNEVTFYKNLTRISTSPEVTVNSLEEEEVCEEEYLQVQEMVICNIGESRESFLKRFKP 1250

Query: 726  LIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQAL 547
            LI++L+EAG+IGE+PL+HWS+N V+CQLDI NPDF + D+PLK VTPQ++++ K+H++AL
Sbjct: 1251 LIEELKEAGYIGENPLQHWSKNGVLCQLDIKNPDFIIEDRPLKSVTPQMKESFKKHVKAL 1310

Query: 546  LDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPG 367
            LD++VIRPSKSRHRTTA++VNS TT+DP+TG E KGKER+VFNYKRLNDIT+KDQYSLPG
Sbjct: 1311 LDLRVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDITHKDQYSLPG 1370

Query: 366  ISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVV 187
            I++I+K++GNS+I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP +
Sbjct: 1371 INTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSI 1430

Query: 186  FQRKMDNCFRGAEEFIAL 133
            FQRKM  CF G EEFIA+
Sbjct: 1431 FQRKMGECFNGTEEFIAV 1448


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  437 bits (1125), Expect = e-136
 Identities = 204/317 (64%), Positives = 255/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SR+SF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRESFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++TPQ++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+K KER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS+I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  437 bits (1125), Expect = e-136
 Identities = 204/317 (64%), Positives = 255/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SR+SF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRESFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++T Q++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+KGKER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS+I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  436 bits (1122), Expect = e-136
 Identities = 204/317 (64%), Positives = 254/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SR+SF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRESFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++T Q++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+KGKER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  435 bits (1118), Expect = e-135
 Identities = 203/317 (64%), Positives = 254/317 (80%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SR+SF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRESFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++TPQ++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+K +ER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKREERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
          Length = 357

 Score =  398 bits (1023), Expect = e-135
 Identities = 190/321 (59%), Positives = 243/321 (75%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS Q   +KLK G+M I ++ FRIPY YSF+M +GD IQ+I+GCNF+++M GGVR+
Sbjct: 30   FSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 89

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-----IKEAVFYNLEVSRKSFVNK 736
            EGNTVTFYK +T INT                         I+E V Y+ E     F  K
Sbjct: 90   EGNTVTFYKQITSINTRLAAPLLKQEKEEKEEEFNLDEHRLIQEMVAYSTERPFVHFQQK 149

Query: 735  FSPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHI 556
            F+ LI++L+  G+IGE+P+K+W++NKVVC LDI N D  + D+PLKHVTPQ++++ ++H+
Sbjct: 150  FAGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNSDMVIEDRPLKHVTPQMEESFRKHV 209

Query: 555  QALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYS 376
            +ALL I  IRPSKSRHRTTA++V+S T+IDP TG EVKGKER+VFNYKRLND+TNKDQYS
Sbjct: 210  EALLKIGAIRPSKSRHRTTAIMVSSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYS 269

Query: 375  LPGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNA 196
            LPGI +I++++  S I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M  GLKNA
Sbjct: 270  LPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPLGLKNA 329

Query: 195  PVVFQRKMDNCFRGAEEFIAL 133
            P VFQRKMD+CF+G E FIA+
Sbjct: 330  PAVFQRKMDHCFKGTEAFIAV 350


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  431 bits (1109), Expect = e-134
 Identities = 203/317 (64%), Positives = 253/317 (79%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            Q NG+NS Q   KKLK GRM IG N FRIP+TYS  + +GD+IQMI+GCNF++AM GGVR
Sbjct: 1116 QLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVR 1175

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPL 724
            IEGN VTFYKNLT I+T                    ++E V  N+  SR+SF+ KF PL
Sbjct: 1176 IEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIGESRESFLKKFRPL 1235

Query: 723  IKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALL 544
            +++L+EAGFIGE+PL+HW +N ++CQLDI NPDF + D+PLK++TPQ++++ K+HI+ LL
Sbjct: 1236 LEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLL 1295

Query: 543  DIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGI 364
            D+ VIR SKSRHRTTA++VNS TT+DP+TG E+K KER+VFNYKRLNDIT+KDQYSLPGI
Sbjct: 1296 DLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGI 1355

Query: 363  SSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVF 184
            ++I+KKVGNS I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+ L M FGLKNAP VF
Sbjct: 1356 NTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEGLVMPFGLKNAPSVF 1415

Query: 183  QRKMDNCFRGAEEFIAL 133
            QRKMD CF+G E+FIA+
Sbjct: 1416 QRKMDECFKGTEDFIAV 1432


>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
          Length = 579

 Score =  404 bits (1038), Expect = e-134
 Identities = 194/319 (60%), Positives = 243/319 (76%), Gaps = 2/319 (0%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            +F G NS  TA KKLK G M+IGD++FRIPYT++F + LG   Q+I+GCNF+++M GGVR
Sbjct: 63   KFTGANSVMTARKKLKYGNMRIGDHHFRIPYTFAFPLKLGGGEQLILGCNFIRSMNGGVR 122

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAI--KEAVFYNLEVSRKSFVNKFS 730
            IEG+ VTFYKN+T I T                    I  +E+      V   +F  KF 
Sbjct: 123  IEGDEVTFYKNVTTIKTQQEVPKVLALEELEMEEEEYIAMQESCSAICPVVNINFTQKFG 182

Query: 729  PLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQA 550
             LI++L+ AG+IGE+P+K W++NKV C+LDIINPD T+ DKPLKHVTP +++A ++HIQA
Sbjct: 183  DLIQELKNAGYIGEEPMKFWAQNKVTCKLDIINPDLTIQDKPLKHVTPSMEEAFRKHIQA 242

Query: 549  LLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLP 370
            LL +KVIRPS S+HRTTA IV+S TT+DP+TG E KGKER+VFNYKRLND T KDQYSLP
Sbjct: 243  LLKLKVIRPSTSKHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYKRLNDNTEKDQYSLP 302

Query: 369  GISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPV 190
            GI++I+K++G S IYSKFDLKSGFHQVAM P+SI+WT  W P+GLY+WL M FGLKNAP 
Sbjct: 303  GINTILKRIGQSVIYSKFDLKSGFHQVAMDPESIQWTAFWVPDGLYEWLVMPFGLKNAPA 362

Query: 189  VFQRKMDNCFRGAEEFIAL 133
            VFQRKMDNCFRG E+FIA+
Sbjct: 363  VFQRKMDNCFRGTEDFIAV 381


>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 531

 Score =  401 bits (1031), Expect = e-133
 Identities = 193/316 (61%), Positives = 239/316 (75%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F G+NS  TADKKLKGGRM IGD  FRIPYTY+F M +G+ IQM+IGCNF++AM GGVRI
Sbjct: 113  FKGVNSETTADKKLKGGRMVIGDQQFRIPYTYAFPMKIGEDIQMLIGCNFIRAMHGGVRI 172

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLEVSRKSFVNKFSPLI 721
            EG+ VTFYKN+T I+                     I+    + +++    F  +F  LI
Sbjct: 173  EGDEVTFYKNVTTIHANITSSCIEDEEYGMAQE---IERMSAHEIQIPAP-FKRQFEGLI 228

Query: 720  KQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQALLD 541
            KQL+ AG+IG++P+KHW  NKV CQLDI NPD T+ D+PLK VTPQ+Q++ +RHI+ALLD
Sbjct: 229  KQLQAAGYIGDNPIKHWLANKVTCQLDIKNPDITIEDRPLKRVTPQMQESFQRHIKALLD 288

Query: 540  IKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPGIS 361
            +KVIRP +S+HRTTA + +S TTI+P TG E +GKER+VFNYKRLND T+KDQYSLPGI+
Sbjct: 289  LKVIRPCQSKHRTTAFLASSGTTINPVTGKEERGKERMVFNYKRLNDNTHKDQYSLPGIN 348

Query: 360  SIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVVFQ 181
            +II K+GN  +YSKFDLKSGFHQVAMHP+SI WT    PNGLY+WL M FGLKNAP VFQ
Sbjct: 349  TIINKIGNCSVYSKFDLKSGFHQVAMHPNSIPWTAFLVPNGLYEWLVMPFGLKNAPAVFQ 408

Query: 180  RKMDNCFRGAEEFIAL 133
            R+MD CF+G E FIA+
Sbjct: 409  RRMDYCFKGTENFIAV 424


>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score =  414 bits (1063), Expect = e-127
 Identities = 201/324 (62%), Positives = 247/324 (76%), Gaps = 7/324 (2%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            +F G+NS   ++KK+K G M+IG++ FRIP+TY F + L D IQMIIGCNF++AM GG+R
Sbjct: 1312 RFTGVNSTSHSNKKMKAGVMKIGEHFFRIPFTYIFPLKL-DDIQMIIGCNFIRAMAGGIR 1370

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAVFYNLE-------VSRKSF 745
            IEGN VTFYKN+T I T                    ++E  F +L         + K F
Sbjct: 1371 IEGNEVTFYKNVTTIKTLPYASAAASIEELD------LEEEEFISLTQAAEPTVTNNKEF 1424

Query: 744  VNKFSPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALK 565
              +  P IK L+E GFIGE+P+KHW +NKV C+LDIINPD T+ D+PLKHVTPQ+Q+A K
Sbjct: 1425 CQRIEPTIKALKEQGFIGEEPMKHWVKNKVTCKLDIINPDLTIEDRPLKHVTPQMQEAFK 1484

Query: 564  RHIQALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKD 385
            +H+QALL +KVIRPS+SRHRTTA+IV S TT+DP+TG EVKGKER+VFNYKRLND TNKD
Sbjct: 1485 KHVQALLKLKVIRPSQSRHRTTAIIVYSGTTVDPKTGKEVKGKERMVFNYKRLNDNTNKD 1544

Query: 384  QYSLPGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGL 205
            QYSLPGI++II++VG S+IYSKFDLKSGFHQVAM PDSIEWT  W P GL++WL M FGL
Sbjct: 1545 QYSLPGINTIIQRVGQSKIYSKFDLKSGFHQVAMDPDSIEWTAFWVPEGLFEWLVMPFGL 1604

Query: 204  KNAPVVFQRKMDNCFRGAEEFIAL 133
            KNAP VFQRKMDNCF+G E+FIA+
Sbjct: 1605 KNAPAVFQRKMDNCFKGTEKFIAV 1628


>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  408 bits (1048), Expect = e-126
 Identities = 197/319 (61%), Positives = 245/319 (76%), Gaps = 3/319 (0%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS  + +KKL+ G+M IGDN FRIPYTY F M LGD IQMI+GCNF+++MQGGVRI
Sbjct: 1138 FSGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCNFIRSMQGGVRI 1197

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAV---FYNLEVSRKSFVNKFS 730
            EG+TV FYKN+T I T                    I  A    +  +E+S   F   + 
Sbjct: 1198 EGDTVAFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIAAICAYGGMEIS-SPFQFSYQ 1256

Query: 729  PLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQA 550
             LI++L++ G+IG+DP+K+WS NK+ CQL+I NPD T+ D+PLKH++PQ++ + +RH +A
Sbjct: 1257 KLIQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQMEASYRRHTEA 1316

Query: 549  LLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLP 370
            +L +  IRPSKS+HRTTA+IVNS TTIDP TG EV+GKER+VFNYKRLND T+KDQYSLP
Sbjct: 1317 VLKLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLNDNTHKDQYSLP 1376

Query: 369  GISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPV 190
            GI++II+KVGNS+IYSKFDLKSGFHQVAMHP SIEWT  W P GLY+WLAM FGLKNAP 
Sbjct: 1377 GINTIIQKVGNSKIYSKFDLKSGFHQVAMHPYSIEWTAFWVPQGLYEWLAMPFGLKNAPA 1436

Query: 189  VFQRKMDNCFRGAEEFIAL 133
            VFQRKMDNCF+G E FIA+
Sbjct: 1437 VFQRKMDNCFKGTENFIAV 1455


>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  407 bits (1047), Expect = e-126
 Identities = 197/318 (61%), Positives = 245/318 (77%), Gaps = 3/318 (0%)
 Frame = -1

Query: 1077 NGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRIE 898
            +GINS  + +KKL+ G+M IGDN FRIPYTY F M LGD IQMI+GCNF+++MQGGVRIE
Sbjct: 1139 SGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCNFIRSMQGGVRIE 1198

Query: 897  GNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAIKEAV---FYNLEVSRKSFVNKFSP 727
            G+TVTFYKN+T I T                    I  A    +  +E+S   F   +  
Sbjct: 1199 GDTVTFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIATICAYGGMEIS-SPFQFSYQK 1257

Query: 726  LIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQAL 547
            LI++L++ G+IG+DP+K+WS NK+ CQL+I NPD T+ D+PLKH++PQ++ + +RH +A+
Sbjct: 1258 LIQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQMEASYRRHTEAV 1317

Query: 546  LDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLPG 367
            L +  IRPSKS+HRTTA+IVNS TTIDP TG EV+GKER+VFNYKRLND T+KDQYSLPG
Sbjct: 1318 LKLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLNDNTHKDQYSLPG 1377

Query: 366  ISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPVV 187
            I++II+KVGNS+IYSKFDLKSGFHQVAMHP SIEWT  W P GLY+WLAM FGLKNAP V
Sbjct: 1378 INTIIQKVGNSKIYSKFDLKSGFHQVAMHPYSIEWTAFWVPQGLYEWLAMPFGLKNAPAV 1437

Query: 186  FQRKMDNCFRGAEEFIAL 133
            FQRKMDNCF+G E FIA+
Sbjct: 1438 FQRKMDNCFKGTENFIAV 1455


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  402 bits (1034), Expect = e-125
 Identities = 190/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS Q   +K+K G+M I ++ FRIPY YSF+M +GD IQ+I+GCNF+++M GGVR+
Sbjct: 745  FSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 804

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA----IKEAVFYNLEVSRKSFVNKF 733
            EGNT+TFYK +T INT                        I+E V Y+ E     F  KF
Sbjct: 805  EGNTITFYKQITSINTRLAAPLIQQDEEKEEELNLEEHRLIQEMVAYSTERPFVHFQQKF 864

Query: 732  SPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQ 553
            + LI++L+  G+IGE+P+K+W++N+VVC LDI NPD  + D+PLKHVTPQ++++ +RH++
Sbjct: 865  AGLIQELKAQGYIGEEPMKYWAKNRVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRRHVE 924

Query: 552  ALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSL 373
            ALL I  IRPSKSRHRTTA+IVNS T+IDP TG EVKGKER+VFNYKRLND+TNKDQYSL
Sbjct: 925  ALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSL 984

Query: 372  PGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAP 193
            PGI +I++++  S I+SKFDLKSGF QVAMHPDS+EWT  W P+GLY+WL M FGLKNAP
Sbjct: 985  PGIQTILQRLKGSTIFSKFDLKSGFQQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNAP 1044

Query: 192  VVFQRKMDNCFRGAEEFIAL 133
             VFQRKMD+CF+G E FIA+
Sbjct: 1045 AVFQRKMDHCFKGTEAFIAV 1064


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  406 bits (1043), Expect = e-125
 Identities = 193/321 (60%), Positives = 245/321 (76%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS Q   +K+K G+M I ++ FRIPY YSF+M +GD IQ+I+GCNF+++M GGVR+
Sbjct: 1221 FSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 1280

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-----IKEAVFYNLEVSRKSFVNK 736
            EGNTVTFYK +T INT                         I+E V Y+ E     F  K
Sbjct: 1281 EGNTVTFYKQITSINTRLAAPLLKQDEEEKEEELNLDEHRLIQEMVAYSTERPFVHFQQK 1340

Query: 735  FSPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHI 556
            F+ LI++L+  G+IGE+P+K+W++NKVVC LDI NPD  + D+PLKHVTPQ++++ ++H+
Sbjct: 1341 FAGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHV 1400

Query: 555  QALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYS 376
            +ALL I  IRPSKSRHRTTA+IVNS T+IDP TG EVKGKER+VFNYKRLND+TNKDQYS
Sbjct: 1401 EALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYS 1460

Query: 375  LPGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNA 196
            LPGI +I++++  S I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNA
Sbjct: 1461 LPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNA 1520

Query: 195  PVVFQRKMDNCFRGAEEFIAL 133
            P VFQRKMD+CF+G E FIA+
Sbjct: 1521 PAVFQRKMDHCFKGTEAFIAV 1541


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  404 bits (1038), Expect = e-124
 Identities = 191/321 (59%), Positives = 244/321 (76%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS Q   +KLK G+M I ++ FRIPY YSF+M +GD IQ+I+GCNF+++M GGVR+
Sbjct: 1222 FSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 1281

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-----IKEAVFYNLEVSRKSFVNK 736
            EGNT+TFYK +T INT                         I+E V Y+ E     F  K
Sbjct: 1282 EGNTITFYKQITSINTRLAAPLLKQEEEEKEEELNLEEHRLIQEMVAYSTERPFVQFQQK 1341

Query: 735  FSPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHI 556
            F+ LI+ L+  G+IGE+P+K+W++N+VVC LDI NPD  + D+PLKHVTPQ++++ ++H+
Sbjct: 1342 FAGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHV 1401

Query: 555  QALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYS 376
            +ALL I  IRPSKSRHRTTA+IVNS T+IDP TG EVKGKER+VFNYKRLND+TNKDQYS
Sbjct: 1402 EALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYS 1461

Query: 375  LPGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNA 196
            LPGI +I++++  S I+SKFDLKSGFHQVAMHPDS+EWT  W P+GLY+WL M FGLKNA
Sbjct: 1462 LPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNA 1521

Query: 195  PVVFQRKMDNCFRGAEEFIAL 133
            P VFQRKMD+CF+G E FIA+
Sbjct: 1522 PAVFQRKMDHCFKGTEAFIAV 1542


>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1897

 Score =  404 bits (1037), Expect = e-124
 Identities = 193/319 (60%), Positives = 240/319 (75%), Gaps = 2/319 (0%)
 Frame = -1

Query: 1083 QFNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVR 904
            +F G NS  TA KKLK G M+IGD+ FRIPYTY+F + LG   Q+I+GCNF+++M GGVR
Sbjct: 1249 KFTGANSVMTAIKKLKNGTMRIGDHQFRIPYTYAFPLKLGGGEQLILGCNFIRSMNGGVR 1308

Query: 903  IEGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXAI--KEAVFYNLEVSRKSFVNKFS 730
            IEGN VTFYKN+T I T                    I  +E+      V   +F  +F 
Sbjct: 1309 IEGNEVTFYKNVTTIQTQQEVPKVLALEELEMGEEEYIAIQESCSTICPVVNINFAQRFE 1368

Query: 729  PLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHIQA 550
             LI +L+ AG+IGE+P+K WS NKV C+L+IINP+ T+ DKPLKHVTP +++A ++H+QA
Sbjct: 1369 DLILELKSAGYIGEEPMKFWSHNKVTCKLEIINPELTIQDKPLKHVTPSMEEAFRKHVQA 1428

Query: 549  LLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYSLP 370
            LL +KVIRPS SRHRTTA IV+S TT+DP+TG E KGKER+VFNY+RLND T KDQYSLP
Sbjct: 1429 LLKLKVIRPSTSRHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYRRLNDNTEKDQYSLP 1488

Query: 369  GISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNAPV 190
            GI++I+K++G S IYSKFDLKSGFHQVAM PDS++WT  W P+GLY+WL M FGLKNAP 
Sbjct: 1489 GINTILKRIGQSVIYSKFDLKSGFHQVAMDPDSVQWTAFWVPDGLYEWLVMPFGLKNAPA 1548

Query: 189  VFQRKMDNCFRGAEEFIAL 133
            VFQRKMDNCFRG E+FIA+
Sbjct: 1549 VFQRKMDNCFRGTEDFIAV 1567


>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
 gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
          Length = 1983

 Score =  403 bits (1036), Expect = e-124
 Identities = 191/321 (59%), Positives = 244/321 (76%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1080 FNGINSWQTADKKLKGGRMQIGDNNFRIPYTYSFKMTLGDSIQMIIGCNFVKAMQGGVRI 901
            F+GINS Q   +KLK G+M I ++ FRIPY YSF+M +GD IQ+I+GCNF+++M GGVR+
Sbjct: 1237 FSGINSKQQVKQKLKTGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 1296

Query: 900  EGNTVTFYKNLTVINTXXXXXXXXXXXXXXXXXXXA-----IKEAVFYNLEVSRKSFVNK 736
            EGNT+TFYK +T INT                         I+E V Y+ E     F  K
Sbjct: 1297 EGNTITFYKQITSINTRLAAPLLKQEEEEKEEELNLEEHRLIQEMVAYSTERPFVQFQQK 1356

Query: 735  FSPLIKQLEEAGFIGEDPLKHWSRNKVVCQLDIINPDFTVVDKPLKHVTPQLQKALKRHI 556
            F+ LI+ L+  G+IGE+P+K+W++N+VVC LDI NPD  + D+PLKHVTPQ++++ ++H+
Sbjct: 1357 FAGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHV 1416

Query: 555  QALLDIKVIRPSKSRHRTTALIVNSKTTIDPQTGNEVKGKERLVFNYKRLNDITNKDQYS 376
            +ALL I  IRPSKSRHRTTA+IVNS T+IDP TG EVKGKER+VFNYKRLND+TNKDQYS
Sbjct: 1417 EALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYS 1476

Query: 375  LPGISSIIKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTVLWTPNGLYKWLAMLFGLKNA 196
            LPGI +I++++  S I+SKFDLKSGFHQVAMHPDSIEWT  W P+GLY+WL M FGLKNA
Sbjct: 1477 LPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNA 1536

Query: 195  PVVFQRKMDNCFRGAEEFIAL 133
            P +FQRKMD+CF+G E FIA+
Sbjct: 1537 PAIFQRKMDHCFKGTEAFIAV 1557