BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040267
         (2700 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO65975.1| reverse transcriptase [Corchorus capsularis]            35   1e-07
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom...    36   2e-07

>gb|OMO65975.1| reverse transcriptase [Corchorus capsularis]
          Length = 868

 Score = 35.4 bits (80), Expect(4) = 1e-07
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 427 AIHPCSSNMYIHFKKSYYWCRIKMSVSEFVLGYLIC 534
           A+HP  + MY   ++SY+W  +K  ++EFV   L+C
Sbjct: 458 ALHPGITKMYRTIRESYWWPGMKKDIAEFVSRCLVC 493



 Score = 32.0 bits (71), Expect(4) = 1e-07
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +2

Query: 584 IVEWKL*HIIVDFVSKLLR*LKGYNSM*VIMHRLT 688
           I EWK  HI +DF+  L R  +G++++ VI+ RLT
Sbjct: 512 IPEWKWEHITMDFIVGLPRIRRGHDAIWVIVDRLT 546



 Score = 29.3 bits (64), Expect(4) = 1e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 700 FLAIKKVDSFNELTDLYYREIMRLHRISTIITLDKE 807
           FL ++   S   L  LY  EI+RLH +   I LD++
Sbjct: 551 FLLVRITFSTERLARLYVAEIVRLHGVPVSIVLDRD 586



 Score = 28.5 bits (62), Expect(4) = 1e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 864 FSIAFHLKHTKQLERIIQTVE-MSTDCIIK 950
           FS AFH +   Q ERIIQT+E M   C+++
Sbjct: 607 FSTAFHPQTDGQFERIIQTLEDMLRACVLE 636


>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1502

 Score = 35.8 bits (81), Expect(4) = 2e-07
 Identities = 23/84 (27%), Positives = 44/84 (52%)
 Frame = +2

Query: 584  IVEWKL*HIIVDFVSKLLR*LKGYNSM*VIMHRLTMFVLS*RLRRLTPSMN*QTSTIERL 763
            ++EWK  HI +DFV+ L R   GY+S+ +++ RLT       ++    +       ++ +
Sbjct: 1193 VLEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEI 1252

Query: 764  *DYTGYQLSLH*TKRSRFTS*FYG 835
                G  +S+   + ++FTS F+G
Sbjct: 1253 VRLHGIPISIVSDRGAQFTSRFWG 1276



 Score = 32.0 bits (71), Expect(4) = 2e-07
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +2

Query: 293  SNDALRFGGRLYALEKH-LAKELLIDAHKSKFAIHPCSSNIY 415
            ++  LR+G RLY  +   L +E+L +AH + + +HP ++ +Y
Sbjct: 1129 TDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMY 1170



 Score = 30.8 bits (68), Expect(4) = 2e-07
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 430  IHPCSSNMYIHFKKSYYWCRIKMSVSEFVLGYL 528
            +HP ++ MY   K+ Y+W  +K  V+EF L  L
Sbjct: 1162 VHPGATKMYQDLKEVYWWEGLKRDVAEFPLPVL 1194



 Score = 26.2 bits (56), Expect(4) = 2e-07
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 864  FSIAFHLKHTKQLERIIQTVE-MSTDCII 947
            FS AFH +   Q ER IQT+E M   C+I
Sbjct: 1288 FSTAFHPQTDGQSERTIQTLEDMLRACVI 1316