BLASTX nr result

ID: Cheilocostus21_contig00040234 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040234
         (573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009415474.1| PREDICTED: protein transport protein SEC16B ...    64   3e-08
ref|XP_009415458.1| PREDICTED: protein transport protein SEC16B ...    64   3e-08
ref|XP_009385851.1| PREDICTED: protein transport protein SEC16A ...    57   5e-06

>ref|XP_009415474.1| PREDICTED: protein transport protein SEC16B homolog isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 1415

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = -2

Query: 164 MATPSAFPLEDQTXXXXXXXXXXXXFGVEGSRPHSKEIVRDLSNLSLDDIGTSL 3
           M +PS F +EDQT            FGVEGS PH KEIVRD+SNLSLDD+GTSL
Sbjct: 1   MGSPSPFQVEDQTDEDFFDKLVDDDFGVEGSVPHPKEIVRDISNLSLDDVGTSL 54


>ref|XP_009415458.1| PREDICTED: protein transport protein SEC16B homolog isoform X1
           [Musa acuminata subsp. malaccensis]
 ref|XP_009415466.1| PREDICTED: protein transport protein SEC16B homolog isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 1421

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = -2

Query: 164 MATPSAFPLEDQTXXXXXXXXXXXXFGVEGSRPHSKEIVRDLSNLSLDDIGTSL 3
           M +PS F +EDQT            FGVEGS PH KEIVRD+SNLSLDD+GTSL
Sbjct: 1   MGSPSPFQVEDQTDEDFFDKLVDDDFGVEGSVPHPKEIVRDISNLSLDDVGTSL 54


>ref|XP_009385851.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009385853.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009385854.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
          Length = 1401

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = -2

Query: 164 MATPSAFPLEDQTXXXXXXXXXXXXFGVEGSRPHSKEIVRDLSNLSLDDIGTSL 3
           M +PS   +EDQT            FGVEGS P S++I RDLSNLSLDD+GTSL
Sbjct: 1   MGSPSPLQVEDQTDEDFFDKLVDDDFGVEGSTPRSEKIARDLSNLSLDDVGTSL 54


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