BLASTX nr result

ID: Cheilocostus21_contig00040166 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040166
         (466 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418386.1| PREDICTED: probable NAD(P)H dehydrogenase su...    89   1e-19
ref|XP_008791237.1| PREDICTED: probable NAD(P)H dehydrogenase su...    61   1e-08
ref|XP_010923586.1| PREDICTED: probable NAD(P)H dehydrogenase su...    60   2e-08

>ref|XP_009418386.1| PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 159

 Score = 89.4 bits (220), Expect = 1e-19
 Identities = 50/82 (60%), Positives = 60/82 (73%)
 Frame = +3

Query: 219 LGRPFSIVASKSTRPVRKIDGSPPRKQQPAQPSVAEVKRAIGVADDSFGAPPEAXXXXXX 398
           LGRP +IVASK+TRP R+++GSPPRKQQP   SVAEV++AIGV DD F +P  A      
Sbjct: 28  LGRP-TIVASKTTRPRRRVNGSPPRKQQP---SVAEVQKAIGVVDDPFRSPDGASSSSSS 83

Query: 399 XXPFLRFLEKESAAERKLRETA 464
             PFL FL+ ES AERKLR+ A
Sbjct: 84  SSPFLGFLQDESPAERKLRKAA 105


>ref|XP_008791237.1| PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3,
           chloroplastic [Phoenix dactylifera]
          Length = 159

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
 Frame = +3

Query: 225 RPFSIVASKSTRPVRKIDGSPPRKQQPAQPSVAEVKRAIGVADDSFGAPPEAXXXXXXXX 404
           R  + +AS++ RP R+ +GSPPRKQ    PSVAEV+RAIGVA D F +   +        
Sbjct: 29  RTRTTLASQTARPSRRTNGSPPRKQ----PSVAEVERAIGVASDPFQSSSSS-----SSS 79

Query: 405 PFLRFL------EKESAAERKLRETA 464
           PF+ FL      + E   ERK+RETA
Sbjct: 80  PFMDFLSSTPIGQAEGPTERKIRETA 105


>ref|XP_010923586.1| PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3,
           chloroplastic [Elaeis guineensis]
          Length = 163

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
 Frame = +3

Query: 225 RPFSIVASKSTRPVRKIDGSPPRKQQPAQPSVAEVKRAIGVADDSFGAPPEAXXXXXXXX 404
           R  +I+AS++ RP  + +GSPPRKQ    PSVAEV+RAIGVA D F +   +        
Sbjct: 33  RTRTILASQTARPSHRTNGSPPRKQ----PSVAEVERAIGVASDPFQSSTSS-----SSS 83

Query: 405 PFLRFL------EKESAAERKLRETA 464
           PFL F+      + E   ERK+RETA
Sbjct: 84  PFLDFVSSTPIGQAEGPTERKIRETA 109


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