BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040038
         (499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009384780.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-30
ref|XP_008781836.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-15
ref|XP_008781835.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-15
ref|XP_010913678.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   4e-13

>ref|XP_009384780.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Musa acuminata subsp. malaccensis]
 ref|XP_018677959.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 868

 Score =  125 bits (313), Expect = 5e-30
 Identities = 76/153 (49%), Positives = 89/153 (58%)
 Frame = -3

Query: 461 MEGAPFTSRPALPAQGPKTARNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLXXXXXX 282
           MEGA F+SRPA P    KT R  ST++ KFN                      L      
Sbjct: 36  MEGALFSSRPAFPTHTSKTPRKPSTNHPKFN----PPPPPPSHSVPLDSLLHHLQHLTQE 91

Query: 281 XXXXXXXXXXXXXXPKFPSLRLAPTSIRREKQTSASRRRLAGGADGVRFLQDTRLGFLSA 102
                         P FPSLRLA T+I REK T ASR RLAG  +GV FL+D RLGFLS 
Sbjct: 92  TSTTLHPPQPTNKNPNFPSLRLASTTIHREKATPASRPRLAGSENGVLFLRDPRLGFLSG 151

Query: 101 AGKSLLNSIIEQPLVDVISLLDSRKNEIFGVDW 3
           AGKSLL SI+EQPL+D++SLL+S+K+EIFGVDW
Sbjct: 152 AGKSLLRSIVEQPLLDLVSLLESKKDEIFGVDW 184


>ref|XP_008781836.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 739

 Score = 82.0 bits (201), Expect = 5e-15
 Identities = 61/153 (39%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
 Frame = -3

Query: 461 MEGAPFTSRPALPAQGPKTARNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLXXXXXX 282
           MEG  F +RP LP Q  K  +  S   T+FN+                     L      
Sbjct: 1   MEGTLFPNRPTLPTQTTKPPQKPSNHPTRFNLSLPPPPPSPSKSIPLDSLLQHLTEENRT 60

Query: 281 XXXXXXXXXXXXXXPKFPSLRLAPTSIRREKQTSASRRRLAGGADGVRF-LQDTRLGFLS 105
                           FPSL LA +SI  EK + AS  RL  G +G R  LQD RL FLS
Sbjct: 61  TPSHKNPT--------FPSLELALSSIHEEKPSPASLPRLGNGEEGFRGGLQDRRLEFLS 112

Query: 104 AAGKSLLNSIIEQPLVDVISLLDSRKNEIFGVD 6
             GKSLLNSII+QPL  + S L+S K+EIFG+D
Sbjct: 113 RKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 145


>ref|XP_008781835.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 834

 Score = 82.0 bits (201), Expect = 5e-15
 Identities = 61/153 (39%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
 Frame = -3

Query: 461 MEGAPFTSRPALPAQGPKTARNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLXXXXXX 282
           MEG  F +RP LP Q  K  +  S   T+FN+                     L      
Sbjct: 1   MEGTLFPNRPTLPTQTTKPPQKPSNHPTRFNLSLPPPPPSPSKSIPLDSLLQHLTEENRT 60

Query: 281 XXXXXXXXXXXXXXPKFPSLRLAPTSIRREKQTSASRRRLAGGADGVRF-LQDTRLGFLS 105
                           FPSL LA +SI  EK + AS  RL  G +G R  LQD RL FLS
Sbjct: 61  TPSHKNPT--------FPSLELALSSIHEEKPSPASLPRLGNGEEGFRGGLQDRRLEFLS 112

Query: 104 AAGKSLLNSIIEQPLVDVISLLDSRKNEIFGVD 6
             GKSLLNSII+QPL  + S L+S K+EIFG+D
Sbjct: 113 RKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 145


>ref|XP_010913678.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g18940, chloroplastic [Elaeis guineensis]
          Length = 828

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 59/153 (38%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
 Frame = -3

Query: 461 MEGAPFTSRPALPAQGPKTARNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLXXXXXX 282
           MEG  F +RP LP Q  K     S   TKFN+                            
Sbjct: 1   MEGTLFPNRPTLPNQTTKPPEKPSNHPTKFNLSLPPPPPLSLPVPSXLDSFLQHLTQENR 60

Query: 281 XXXXXXXXXXXXXXPKFPSLRLAPTSIRREKQTSASRRRLAGGADGVRF-LQDTRLGFLS 105
                           FPSL LA +SI +EK + A+  RL  G +  R   QD RL FLS
Sbjct: 61  TTPSHKNPT-------FPSLELALSSIHQEKSSPATLPRLGNGQEDFRGGQQDPRLEFLS 113

Query: 104 AAGKSLLNSIIEQPLVDVISLLDSRKNEIFGVD 6
             GKSLLNSII+QPL  + S L+S K+EIFG+D
Sbjct: 114 RKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 146