BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00040037
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009384780.1| PREDICTED: pentatricopeptide repeat-containi...   159   4e-42
ref|XP_008781836.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-21
ref|XP_008781835.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-21
ref|XP_010913678.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    91   6e-18

>ref|XP_009384780.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Musa acuminata subsp. malaccensis]
 ref|XP_018677959.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 868

 Score =  159 bits (402), Expect = 4e-42
 Identities = 89/153 (58%), Positives = 104/153 (67%)
 Frame = -1

Query: 461 MEGAPFTSRPALPAQAPKTSRNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLTQETTS 282
           MEGA F+SRPA P    KT R  ST++ KFN                      LTQET++
Sbjct: 36  MEGALFSSRPAFPTHTSKTPRKPSTNHPKFN-PPPPPPSHSVPLDSLLHHLQHLTQETST 94

Query: 281 GTSTLHPPPPTSKTRKFPSLRLAPTSIRREKQTPASRRRLAGGEDGVRFLQDTRLGFLSA 102
              TLHPP PT+K   FPSLRLA T+I REK TPASR RLAG E+GV FL+D RLGFLS 
Sbjct: 95  ---TLHPPQPTNKNPNFPSLRLASTTIHREKATPASRPRLAGSENGVLFLRDPRLGFLSG 151

Query: 101 AGKSLLNSIIEQPLVDVISLLDSRKKEIFGVDW 3
           AGKSLL SI+EQPL+D++SLL+S+K EIFGVDW
Sbjct: 152 AGKSLLRSIVEQPLLDLVSLLESKKDEIFGVDW 184


>ref|XP_008781836.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 739

 Score =  100 bits (249), Expect = 2e-21
 Identities = 67/153 (43%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
 Frame = -1

Query: 461 MEGAPFTSRPALPAQAPKTSRNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLTQETTS 282
           MEG  F +RP LP Q  K  +  S   T+FN+                     LT+E  +
Sbjct: 1   MEGTLFPNRPTLPTQTTKPPQKPSNHPTRFNLSLPPPPPSPSKSIPLDSLLQHLTEENRT 60

Query: 281 GTSTLHPPPPTSKTRKFPSLRLAPTSIRREKQTPASRRRLAGGEDGVRF-LQDTRLGFLS 105
                    P+ K   FPSL LA +SI  EK +PAS  RL  GE+G R  LQD RL FLS
Sbjct: 61  --------TPSHKNPTFPSLELALSSIHEEKPSPASLPRLGNGEEGFRGGLQDRRLEFLS 112

Query: 104 AAGKSLLNSIIEQPLVDVISLLDSRKKEIFGVD 6
             GKSLLNSII+QPL  + S L+S K EIFG+D
Sbjct: 113 RKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 145


>ref|XP_008781835.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 834

 Score =  100 bits (249), Expect = 2e-21
 Identities = 67/153 (43%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
 Frame = -1

Query: 461 MEGAPFTSRPALPAQAPKTSRNISTSNTKFNVXXXXXXXXXXXXXXXXXXXXXLTQETTS 282
           MEG  F +RP LP Q  K  +  S   T+FN+                     LT+E  +
Sbjct: 1   MEGTLFPNRPTLPTQTTKPPQKPSNHPTRFNLSLPPPPPSPSKSIPLDSLLQHLTEENRT 60

Query: 281 GTSTLHPPPPTSKTRKFPSLRLAPTSIRREKQTPASRRRLAGGEDGVRF-LQDTRLGFLS 105
                    P+ K   FPSL LA +SI  EK +PAS  RL  GE+G R  LQD RL FLS
Sbjct: 61  --------TPSHKNPTFPSLELALSSIHEEKPSPASLPRLGNGEEGFRGGLQDRRLEFLS 112

Query: 104 AAGKSLLNSIIEQPLVDVISLLDSRKKEIFGVD 6
             GKSLLNSII+QPL  + S L+S K EIFG+D
Sbjct: 113 RKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 145


>ref|XP_010913678.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g18940, chloroplastic [Elaeis guineensis]
          Length = 828

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 66/154 (42%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
 Frame = -1

Query: 461 MEGAPFTSRPALPAQAPKTSRNISTSNTKFNV-XXXXXXXXXXXXXXXXXXXXXLTQETT 285
           MEG  F +RP LP Q  K     S   TKFN+                      LTQE  
Sbjct: 1   MEGTLFPNRPTLPNQTTKPPEKPSNHPTKFNLSLPPPPPLSLPVPSXLDSFLQHLTQENR 60

Query: 284 SGTSTLHPPPPTSKTRKFPSLRLAPTSIRREKQTPASRRRLAGGEDGVR-FLQDTRLGFL 108
           +         P+ K   FPSL LA +SI +EK +PA+  RL  G++  R   QD RL FL
Sbjct: 61  T--------TPSHKNPTFPSLELALSSIHQEKSSPATLPRLGNGQEDFRGGQQDPRLEFL 112

Query: 107 SAAGKSLLNSIIEQPLVDVISLLDSRKKEIFGVD 6
           S  GKSLLNSII+QPL  + S L+S K EIFG+D
Sbjct: 113 SRKGKSLLNSIIKQPLPALNSYLESAKDEIFGLD 146