BLASTX nr result
ID: Cheilocostus21_contig00039922
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00039922
(1112 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 224 7e-96
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 211 2e-88
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 210 2e-88
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 207 7e-88
gb|ACH86210.1| unknown [Citrus yellow mosaic virus] 207 9e-88
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 207 1e-87
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 211 2e-87
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 205 3e-87
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 206 4e-87
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus] 200 7e-87
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 211 1e-86
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 211 1e-86
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 211 1e-86
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 205 1e-86
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 207 1e-86
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 211 1e-86
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 204 2e-86
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 201 6e-86
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 205 3e-84
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus] 197 4e-84
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 224 bits (571), Expect(2) = 7e-96
Identities = 102/154 (66%), Positives = 127/154 (82%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQAIFATME+DL SG QL+YV+PDT+ T+RDFY+NIQISI TRGYENW++GEA
Sbjct: 165 RDNRWQGDQAIFATMEIDLTSGTQLVYVIPDTMMTLRDFYRNIQISILTRGYENWRNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT GV+ RL+NTPNVGF YQ+Q+VTD+L SRGVRALPGRR+ ++QG+NWIIR P+
Sbjct: 225 NLLVTRGVMARLSNTPNVGFAYQIQHVTDHLESRGVRALPGRRYSAEQIQGQNWIIRQPQ 284
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEPA 866
+N P+EV +RNL +G++ I F Y E A
Sbjct: 285 INIPMRPSEVDTRNLYDGSVSIRFRDYAPTDEQA 318
Score = 156 bits (395), Expect(2) = 7e-96
Identities = 83/138 (60%), Positives = 102/138 (73%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLA----GRNLENTLEQQVNPEEQLQLSLREQINLVP 174
+EDQIR YR+GQRR + A + RR+A GR TLEQ VNPEE LQ S++E+ NLVP
Sbjct: 26 YEDQIRDYRRGQRRRFVARQAARRIASRITGRRFNQTLEQVVNPEESLQQSMQERANLVP 85
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRDD +H+VY HR EEAI CVDG Q D+ VI+ +S+ L RS ++I G+MQ
Sbjct: 86 AEVLYRSRRDDINHRVYSHRSEEAILCVDGQQQDRLVIQPDSYEALRRSGFQFIHLGIMQ 145
Query: 349 VRIQILHRRDEGTLVLII 402
VRIQILHR DEGT L++
Sbjct: 146 VRIQILHRADEGTAALVV 163
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 211 bits (536), Expect(2) = 2e-88
Identities = 95/153 (62%), Positives = 122/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYE+WQ+GEA
Sbjct: 170 RDNRWQGDQSIFAIAEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTTGYESWQNGEA 229
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR++ ++GRNWIIR P+
Sbjct: 230 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYNSDMLRGRNWIIRQPQ 289
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
L +P VQ+ NLL+G+I F Y EP
Sbjct: 290 LQVTMMPRSVQTTNLLDGSISARFANYTQAPEP 322
Score = 145 bits (366), Expect(2) = 2e-88
Identities = 77/138 (55%), Positives = 103/138 (74%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQ+R YR+ QRR + A + LRR + GR TLEQ ++PEE+L S++E+ NLVP
Sbjct: 32 FEDQVRDYRRNQRRRFIAEQALRRTIGKIRGRRYNQTLEQTIDPEEELSQSMQERANLVP 91
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYR+RRD+ +H+VY HR EEA+ CV G Q D+S I+ +SF EL RS M++I G++Q
Sbjct: 92 AEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQDRSFIQPDSFQELQRSGMQFIHLGVLQ 150
Query: 349 VRIQILHRRDEGTLVLII 402
VRIQILHR DEGT+ L++
Sbjct: 151 VRIQILHRADEGTMALVV 168
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 210 bits (535), Expect(2) = 2e-88
Identities = 95/153 (62%), Positives = 122/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYE+WQ+GEA
Sbjct: 168 RDNRWQGDQSIFAIAEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTTGYESWQNGEA 227
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR++ ++GRNWIIR P+
Sbjct: 228 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYNSDILRGRNWIIRQPQ 287
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
L +P VQ+ NLL+G+I F Y EP
Sbjct: 288 LQVTMMPRSVQTTNLLDGSISARFANYTQAPEP 320
Score = 145 bits (366), Expect(2) = 2e-88
Identities = 78/138 (56%), Positives = 103/138 (74%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQ+R YR+ QRR + A + LRR + GR TLEQ V+PEE+L S++E+ NLVP
Sbjct: 30 FEDQVRDYRRSQRRRFVAEQALRRTIGKIRGRRYNQTLEQIVDPEEELSQSMQERANLVP 89
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYR+RRD+ +H+VY HR EEA+ CV G Q D+S I+ +SF EL RS M++I G++Q
Sbjct: 90 AEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQDRSFIQPDSFQELQRSGMQFIHLGVLQ 148
Query: 349 VRIQILHRRDEGTLVLII 402
VRIQILHR DEGT+ L++
Sbjct: 149 VRIQILHRADEGTMALVV 166
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 207 bits (528), Expect(2) = 7e-88
Identities = 92/161 (57%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSAADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ 325
Score = 146 bits (369), Expect(2) = 7e-88
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFINMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
Length = 463
Score = 207 bits (526), Expect(2) = 9e-88
Identities = 92/161 (57%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSSADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ 325
Score = 147 bits (370), Expect(2) = 9e-88
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 207 bits (526), Expect(2) = 1e-87
Identities = 92/161 (57%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSSADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ 325
Score = 146 bits (369), Expect(2) = 1e-87
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 211 bits (536), Expect(2) = 2e-87
Identities = 94/153 (61%), Positives = 121/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I F Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARFADYTQAPEP 319
Score = 142 bits (357), Expect(2) = 2e-87
Identities = 77/138 (55%), Positives = 101/138 (73%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L LS++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNLSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H+VY HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR DEGT+ L++
Sbjct: 148 VRLQILHRADEGTMALVV 165
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 205 bits (522), Expect(2) = 3e-87
Identities = 91/161 (56%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+ Y NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKAYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSAADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVTYNQ 325
Score = 146 bits (369), Expect(2) = 3e-87
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFINMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 206 bits (523), Expect(2) = 4e-87
Identities = 90/161 (55%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ ++QG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSTADIQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +P + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPTPVAYNQ 325
Score = 145 bits (367), Expect(2) = 4e-87
Identities = 76/134 (56%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+H+ EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRTDDRHHQVYIHKSEEAILCVDGDQVDRLLIQPESAEQLSRSGMSFIHMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
Length = 1881
Score = 200 bits (509), Expect(2) = 7e-87
Identities = 89/161 (55%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW GDQ+IFATMEVDL G+QL++V+PDT+ TI DF +N+Q+SI TRGY+NWQ+GEA
Sbjct: 166 RDNRWEGDQSIFATMEVDLTHGSQLVFVIPDTMMTIGDFARNVQLSILTRGYQNWQNGEA 225
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T + GRL+NTPNV F YQ+ +VTDYLAS GV+A+ G+++D+R +QG+ W++RPPR
Sbjct: 226 NLLITRSMTGRLSNTPNVAFAYQISDVTDYLASHGVKAIAGKKYDLRGLQGQQWVLRPPR 285
Query: 765 LN-TVRLPTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
N T P V++RNL++G+I + F Y + +R + ++
Sbjct: 286 ANITPMQPNAVETRNLVDGSISLRFHNYEAAPTTSRPTYNE 326
Score = 150 bits (379), Expect(2) = 7e-87
Identities = 76/138 (55%), Positives = 102/138 (73%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRL----AGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQ+R YRQ QRRL+ R RRL GR ++TLEQ+V+P+ L+LS++E+ LVP
Sbjct: 27 FEDQVRDYRQNQRRLFNLQRATRRLRGSVTGRRYQDTLEQEVDPQAALRLSMQERARLVP 86
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRY--IGLMQ 348
AEVLYRSRRD H+VY HR EE+I C DG+Q+D++ I+ ES L RS M + IG++Q
Sbjct: 87 AEVLYRSRRDTVHHRVYTHRSEESILCTDGNQIDRTFIQPESLERLQRSGMAFIHIGILQ 146
Query: 349 VRIQILHRRDEGTLVLII 402
VRIQILHR++EGT+ L++
Sbjct: 147 VRIQILHRQEEGTMALVV 164
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 211 bits (536), Expect(2) = 1e-86
Identities = 94/153 (61%), Positives = 121/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I F Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARFADYTQAPEP 319
Score = 139 bits (351), Expect(2) = 1e-86
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L S++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H+VY HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR DEGT+ L++
Sbjct: 148 VRLQILHRADEGTMALVV 165
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 211 bits (536), Expect(2) = 1e-86
Identities = 94/153 (61%), Positives = 121/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I F Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARFADYTQAPEP 319
Score = 139 bits (351), Expect(2) = 1e-86
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L S++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H+VY HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR DEGT+ L++
Sbjct: 148 VRLQILHRADEGTMALVV 165
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 211 bits (536), Expect(2) = 1e-86
Identities = 94/153 (61%), Positives = 121/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I F Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARFADYTQAPEP 319
Score = 139 bits (351), Expect(2) = 1e-86
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L S++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H+VY HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR DEGT+ L++
Sbjct: 148 VRLQILHRTDEGTMALVV 165
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 205 bits (522), Expect(2) = 1e-86
Identities = 91/161 (56%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSAADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +P + +Q
Sbjct: 285 IPAVPMAPTNVGTRNMIDGSISLRFHSYQPAPDPTPVAYNQ 325
Score = 144 bits (364), Expect(2) = 1e-86
Identities = 76/134 (56%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ Q+R + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMPFIHMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 207 bits (528), Expect(2) = 1e-86
Identities = 92/161 (57%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYSAADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ V + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ 325
Score = 142 bits (358), Expect(2) = 1e-86
Identities = 75/134 (55%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ Q+R + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRI
Sbjct: 90 YRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMPFIHMGIVQVRIP 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 211 bits (536), Expect(2) = 1e-86
Identities = 94/153 (61%), Positives = 121/153 (79%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ TI DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I F Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARFADYTQAPEP 319
Score = 139 bits (350), Expect(2) = 1e-86
Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L S++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H++Y HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQIYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR DEGT+ L++
Sbjct: 148 VRLQILHRADEGTMALVV 165
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 204 bits (519), Expect(2) = 2e-86
Identities = 101/196 (51%), Positives = 133/196 (67%), Gaps = 1/196 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RD RW GDQ+IFATMEVDL G Q+IYVVPDT+ TI DF +NIQISI TRGY NWQ+GEA
Sbjct: 169 RDTRWNGDQSIFATMEVDLTEGRQIIYVVPDTMMTIGDFARNIQISILTRGYSNWQNGEA 228
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTPNV F Y++ NVTDYL S+GV+A+ GRR+D RE+Q + WI+RPP+
Sbjct: 229 NLLVTRGIVGRLSNTPNVAFAYEIGNVTDYLTSQGVQAIAGRRYDSRELQNQQWILRPPQ 288
Query: 765 LNTV-RLPTEVQSRNLLNGNIHINFERYVSVTEPARASTSQALNRXXXXXXXXXXXXXAV 941
+ + + P V +RNL++G+I + F Y + + P S ++ A
Sbjct: 289 VERLPQAPKNVDTRNLIDGSISLRFRDYATTSTPELPSYNEQDEEVDPDEEQLMEHVVAA 348
Query: 942 LIEDGPTYDESEVEDT 989
+E+ P E+ DT
Sbjct: 349 FVEEEP----KEIWDT 360
Score = 145 bits (366), Expect(2) = 2e-86
Identities = 76/139 (54%), Positives = 100/139 (71%), Gaps = 7/139 (5%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGR-----NLENTLEQQVNPEEQLQLSLREQINLV 171
FEDQIR YR QRR YT R +RRL R + TLEQ+V+P+ LQ+S++E+ LV
Sbjct: 29 FEDQIRDYRNSQRRAYTTQRAVRRLRRRITGRQPYQETLEQEVDPQADLQMSMQERARLV 88
Query: 172 PAEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRY--IGLM 345
PAEVLYRSRRD H+VY HR EEAI C DG+QVD++ I+ ES L R+ + + IG+M
Sbjct: 89 PAEVLYRSRRDTIHHRVYSHRSEEAILCTDGNQVDRTFIQPESMEALQRTGISFIHIGIM 148
Query: 346 QVRIQILHRRDEGTLVLII 402
QVR+QILHR++EGT+ L++
Sbjct: 149 QVRLQILHRQNEGTMALVV 167
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 201 bits (510), Expect(2) = 6e-86
Identities = 90/161 (55%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFATME+DL G Q++Y++PDT+ T+RDF +N+QISI T+GY NWQ+GEA
Sbjct: 165 RDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEA 224
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLLVT G+VGRL+NTP V F YQ+QNVTDYL S G++ALPGRR+ +VQG+ W +RP
Sbjct: 225 NLLVTRGIVGRLSNTPIVAFAYQIQNVTDYLVSHGIQALPGRRYSAADVQGQQWFLRPSN 284
Query: 765 LNTVRL-PTEVQSRNLLNGNIHINFERYVSVTEPARASTSQ 884
+ + PT V +RN+++G+I + F Y +PA + +Q
Sbjct: 285 IPADPMAPTNVATRNMIDGSISLRFNSYQPAPDPAPIAYNQ 325
Score = 147 bits (370), Expect(2) = 6e-86
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRRLAGRNLENTLEQQVNPEEQLQLSLREQINLVPAEVL 186
++DQIR YRQ QRR + R +L GR TLEQ V+PE LQLS++E+ LVPAEVL
Sbjct: 30 YDDQIRDYRQWQRRRHNMGRRWNQLMGRPYNQTLEQVVDPEVALQLSMQERARLVPAEVL 89
Query: 187 YRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQVRIQ 360
YRSR DD H+VY+HR EEAI CVDG QVD+ +I+ ES +L RS M +I G++QVRIQ
Sbjct: 90 YRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQ 149
Query: 361 ILHRRDEGTLVLII 402
ILHR+ EGT L++
Sbjct: 150 ILHRQHEGTTALVV 163
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 205 bits (522), Expect(2) = 3e-84
Identities = 92/153 (60%), Positives = 119/153 (77%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW+GDQ+IFA EVDL G+Q++YV+PDT+ I DFY+N+QISIQT GYENWQ+GEA
Sbjct: 167 RDNRWQGDQSIFAISEVDLTRGSQIVYVIPDTMMIIGDFYRNVQISIQTSGYENWQNGEA 226
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+ GRL+NTPNVGF Y++ +VTDYLASRGV+ALPGRR+ ++GRNWIIR P+
Sbjct: 227 NLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYRSEMLRGRNWIIRQPQ 286
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEP 863
+ +P V++RNL++G I Y EP
Sbjct: 287 IQAAMMPRNVETRNLIDGTISARSADYTQAPEP 319
Score = 136 bits (343), Expect(2) = 3e-84
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTASRMLRR----LAGRNLENTLEQQVNPEEQLQLSLREQINLVP 174
FEDQIR YR+ QRR + A + +RR + GR TLEQ V+PE +L S++E+ NLVP
Sbjct: 29 FEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVP 88
Query: 175 AEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRYI--GLMQ 348
AEVLYRSRRD+ +H++Y HR EEA+ CV G Q D+ I+ SF EL RS M++I G++Q
Sbjct: 89 AEVLYRSRRDNINHQIYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGVLQ 147
Query: 349 VRIQILHRRDEGTLVLII 402
VR+QILHR D GT+ L++
Sbjct: 148 VRLQILHRADGGTMALVV 165
>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 197 bits (502), Expect(2) = 4e-84
Identities = 94/162 (58%), Positives = 125/162 (77%)
Frame = +3
Query: 405 RDNRWRGDQAIFATMEVDLASGNQLIYVVPDTITTIRDFYQNIQISIQTRGYENWQDGEA 584
RDNRW D+++FATMEVDL+ G+QL+YV+P+T+ TI DFY N+Q+SI TRGYE W+ GEA
Sbjct: 165 RDNRWPDDRSLFATMEVDLSQGSQLVYVIPNTMMTIGDFYNNVQVSILTRGYEAWR-GEA 223
Query: 585 NLLVTSGVVGRLTNTPNVGFVYQVQNVTDYLASRGVRALPGRRFDVREVQGRNWIIRPPR 764
NLL+T G+VGRL+NTPNVGF Y+VQ+V DYL S GVRA+PGRR V+E+QG NW++RP +
Sbjct: 224 NLLITRGLVGRLSNTPNVGFAYEVQSVVDYLVSHGVRAIPGRRRTVQELQGYNWVVRPTQ 283
Query: 765 LNTVRLPTEVQSRNLLNGNIHINFERYVSVTEPARASTSQAL 890
+ R PTEV +R ++G I + F Y S AR ST++ +
Sbjct: 284 ASIPRQPTEVDTRTNIDGTISLRFGNYTS----ARTSTTRRI 321
Score = 144 bits (362), Expect(2) = 4e-84
Identities = 77/140 (55%), Positives = 102/140 (72%), Gaps = 8/140 (5%)
Frame = +1
Query: 7 FEDQIRRYRQGQRRLYTA----SRMLRRLAGRN-LEN-TLEQQVNPEEQLQLSLREQINL 168
FEDQIR YRQ QRRL A R+ RR+ GR+ L N TLEQQ++P+ QL+ S++E+ +
Sbjct: 24 FEDQIRNYRQRQRRLNNARQVVGRLQRRITGRSQLHNQTLEQQIDPQVQLRNSMQERAAI 83
Query: 169 VPAEVLYRSRRDDNDHKVYVHRLEEAISCVDGHQVDKSVIRHESFGELVRSHMRY--IGL 342
+PAEV+Y SRRDD H+VYVHR EEA+ C D Q D+ I+ ESF +L RS M++ IG+
Sbjct: 84 IPAEVMYHSRRDDEHHRVYVHRSEEALLCTDNQQQDRIFIQEESFKQLQRSRMQFIHIGV 143
Query: 343 MQVRIQILHRRDEGTLVLII 402
+Q+RIQ LHR DEGTL L++
Sbjct: 144 IQLRIQALHRHDEGTLALVV 163