BLASTX nr result

ID: Cheilocostus21_contig00039865 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039865
         (745 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009383262.1| PREDICTED: protein YLS9-like [Musa acuminata...    63   6e-08
ref|NP_001169362.1| uncharacterized protein LOC100383229 [Zea ma...    60   4e-07
gb|ONM19965.1| Late embryogenesis abundant (LEA) hydroxyproline-...    60   4e-07
ref|XP_019163283.1| PREDICTED: protein YLS9 [Ipomoea nil]              58   3e-06

>ref|XP_009383262.1| PREDICTED: protein YLS9-like [Musa acuminata subsp. malaccensis]
          Length = 269

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 35/64 (54%), Positives = 38/64 (59%)
 Frame = -2

Query: 288 MADRVHPVQPPEPVTSGTPNXXXXXXXXXXXXSQTMPCKPAPPLGTYVIQVPKDLVLRNP 109
           M+DRVHPVQP EPVT  TP                +  KP P  G+YVIQVPKDLVLR P
Sbjct: 2   MSDRVHPVQP-EPVTGATPETPRSSVPRSG----NVDPKPGPQPGSYVIQVPKDLVLRTP 56

Query: 108 PPGN 97
           P GN
Sbjct: 57  PEGN 60


>ref|NP_001169362.1| uncharacterized protein LOC100383229 [Zea mays]
 gb|ACN33535.1| unknown [Zea mays]
          Length = 284

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/62 (46%), Positives = 34/62 (54%)
 Frame = -2

Query: 288 MADRVHPVQPPEPVTSGTPNXXXXXXXXXXXXSQTMPCKPAPPLGTYVIQVPKDLVLRNP 109
           MADRVHP  PP P++S  P               +    P PP GTY++QVPKD VLR P
Sbjct: 1   MADRVHPAPPPLPLSSTPPQHPPTTETTPLQQHPSFARPPPPPPGTYIVQVPKDQVLRVP 60

Query: 108 PP 103
           PP
Sbjct: 61  PP 62


>gb|ONM19965.1| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein
           family [Zea mays]
          Length = 284

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/62 (46%), Positives = 34/62 (54%)
 Frame = -2

Query: 288 MADRVHPVQPPEPVTSGTPNXXXXXXXXXXXXSQTMPCKPAPPLGTYVIQVPKDLVLRNP 109
           MADRVHP  PP P++S  P               +    P PP GTY++QVPKD VLR P
Sbjct: 1   MADRVHPAPPPLPLSSTPPQHPPTTETTPLQQHPSFARPPPPPPGTYIVQVPKDQVLRVP 60

Query: 108 PP 103
           PP
Sbjct: 61  PP 62


>ref|XP_019163283.1| PREDICTED: protein YLS9 [Ipomoea nil]
          Length = 271

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -2

Query: 288 MADRVHPVQ-PPEPVTSGTPNXXXXXXXXXXXXSQTMPCKPAPPLGTYVIQVPKDLVLRN 112
           MADRVHP   PP  +   + N                P KPAPP GTYV+QVPKD + R 
Sbjct: 1   MADRVHPRDSPPASLPVSSNNSGEAVGQPAKPPQSPAPAKPAPPPGTYVVQVPKDQIYRY 60

Query: 111 PPPGN 97
           PPP N
Sbjct: 61  PPPEN 65


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