BLASTX nr result
ID: Cheilocostus21_contig00039807
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00039807
(471 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009388080.1| PREDICTED: pre-mRNA-processing protein 40C [... 95 1e-19
ref|XP_017696004.1| PREDICTED: pre-mRNA-processing protein 40C [... 89 2e-17
ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C i... 88 3e-17
ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C i... 88 3e-17
gb|OAY63514.1| Pre-mRNA-processing protein 40C [Ananas comosus] 77 3e-13
ref|XP_020094467.1| pre-mRNA-processing protein 40C isoform X2 [... 77 3e-13
ref|XP_020094466.1| pre-mRNA-processing protein 40C isoform X1 [... 77 3e-13
ref|XP_020599394.1| pre-mRNA-processing protein 40C isoform X2 [... 71 3e-11
ref|XP_020599393.1| pre-mRNA-processing protein 40C isoform X1 [... 71 3e-11
ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus o... 65 3e-09
ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C [... 63 2e-08
ref|XP_020686530.1| pre-mRNA-processing protein 40C isoform X1 [... 61 7e-08
gb|PKA62757.1| Pre-mRNA-processing protein 40C [Apostasia shenzh... 58 8e-07
gb|ERN09468.1| hypothetical protein AMTR_s00029p00102340 [Ambore... 58 1e-06
ref|XP_020525339.1| pre-mRNA-processing protein 40C [Amborella t... 58 1e-06
>ref|XP_009388080.1| PREDICTED: pre-mRNA-processing protein 40C [Musa acuminata subsp.
malaccensis]
Length = 1128
Score = 95.1 bits (235), Expect = 1e-19
Identities = 58/126 (46%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +2
Query: 95 DSLACTVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRF 274
DS+ V V A + S+L G LV A++ +QDSIRA F+S P +V+ APSFSY V+PR
Sbjct: 59 DSVPSNVVVSATLTGSSLLSIGGLVKAHDTSQDSIRAKFSSPPGFVVAAPSFSYGVIPRT 118
Query: 275 NSTSGNSVPPGNPLQTPPFSGLK-XXXXXXXXXXXXXXGQFLGNRSFPFTVVSQAHITPA 451
N TSGN Q SGLK GQFLG R FP+ VVS A++ PA
Sbjct: 119 NLTSGNP-------QQSSSSGLKLTPPVPAAALQPPVPGQFLGTRPFPYNVVSHANVVPA 171
Query: 452 TGQPIQ 469
GQ IQ
Sbjct: 172 AGQQIQ 177
>ref|XP_017696004.1| PREDICTED: pre-mRNA-processing protein 40C [Phoenix dactylifera]
Length = 963
Score = 88.6 bits (218), Expect = 2e-17
Identities = 59/126 (46%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
TV V + S G +VNAN P+QD +RA FA+ YVIPAPSFSY+V PR NS+SG
Sbjct: 71 TVTVSTMTSVGQPPPRGVVVNANTPSQDPVRAKFATPQGYVIPAPSFSYSVFPRVNSSSG 130
Query: 290 ----NSVPPGNPLQTP-PFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPA 451
+S PG L P P S L+ GQFLGNR SF + VVS A+ A
Sbjct: 131 SAQQSSSAPGLRLTPPMPASALQ----------PPVPGQFLGNRPSFSYNVVSNANANSA 180
Query: 452 TGQPIQ 469
TGQ Q
Sbjct: 181 TGQQFQ 186
>ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Elaeis
guineensis]
Length = 1066
Score = 88.2 bits (217), Expect = 3e-17
Identities = 58/126 (46%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
TV V + S G +VNAN PTQD +RA FA+S +V+PAPSFSY V PR NS SG
Sbjct: 71 TVTVSTMTSVGPPPPRGVIVNANTPTQDPVRAKFATSQGFVVPAPSFSYGVFPRVNSASG 130
Query: 290 ----NSVPPGNPLQTP-PFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPA 451
+S PG L P P + L+ GQFLGNR SF + VVS A+ A
Sbjct: 131 SAHQSSSSPGLRLSPPMPATALQ----------PPVPGQFLGNRPSFSYNVVSNANAGSA 180
Query: 452 TGQPIQ 469
TGQ Q
Sbjct: 181 TGQQFQ 186
>ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Elaeis
guineensis]
Length = 1097
Score = 88.2 bits (217), Expect = 3e-17
Identities = 58/126 (46%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
TV V + S G +VNAN PTQD +RA FA+S +V+PAPSFSY V PR NS SG
Sbjct: 71 TVTVSTMTSVGPPPPRGVIVNANTPTQDPVRAKFATSQGFVVPAPSFSYGVFPRVNSASG 130
Query: 290 ----NSVPPGNPLQTP-PFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPA 451
+S PG L P P + L+ GQFLGNR SF + VVS A+ A
Sbjct: 131 SAHQSSSSPGLRLSPPMPATALQ----------PPVPGQFLGNRPSFSYNVVSNANAGSA 180
Query: 452 TGQPIQ 469
TGQ Q
Sbjct: 181 TGQQFQ 186
>gb|OAY63514.1| Pre-mRNA-processing protein 40C [Ananas comosus]
Length = 1054
Score = 76.6 bits (187), Expect = 3e-13
Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
T+ P + + + G LVN N+P+QD +RA +A SP YV+PAPSFSYN PR + G
Sbjct: 74 TLIAPITHAANPAAPRGILVNPNDPSQDPVRAKYAGSPGYVVPAPSFSYNAFPRVSPAVG 133
Query: 290 N---SVPPGNPLQTPPFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATG 457
+ S P TPP GQ+LGNR SF + VV A+ + TG
Sbjct: 134 SNQQSSPAPAFRLTPPM--------PPAALQPPVPGQYLGNRPSFSYNVVPHANSSLPTG 185
Query: 458 QPIQ 469
Q Q
Sbjct: 186 QQFQ 189
>ref|XP_020094467.1| pre-mRNA-processing protein 40C isoform X2 [Ananas comosus]
Length = 1082
Score = 76.6 bits (187), Expect = 3e-13
Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
T+ P + + + G LVN N+P+QD +RA +A SP YV+PAPSFSYN PR + G
Sbjct: 74 TLIAPITHAANPAAPRGILVNPNDPSQDPVRAKYAGSPGYVVPAPSFSYNAFPRVSPAVG 133
Query: 290 N---SVPPGNPLQTPPFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATG 457
+ S P TPP GQ+LGNR SF + VV A+ + TG
Sbjct: 134 SNQQSSPAPAFRLTPPM--------PPAALQPPVPGQYLGNRPSFSYNVVPHANSSLPTG 185
Query: 458 QPIQ 469
Q Q
Sbjct: 186 QQFQ 189
>ref|XP_020094466.1| pre-mRNA-processing protein 40C isoform X1 [Ananas comosus]
Length = 1085
Score = 76.6 bits (187), Expect = 3e-13
Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
T+ P + + + G LVN N+P+QD +RA +A SP YV+PAPSFSYN PR + G
Sbjct: 74 TLIAPITHAANPAAPRGILVNPNDPSQDPVRAKYAGSPGYVVPAPSFSYNAFPRVSPAVG 133
Query: 290 N---SVPPGNPLQTPPFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATG 457
+ S P TPP GQ+LGNR SF + VV A+ + TG
Sbjct: 134 SNQQSSPAPAFRLTPPM--------PPAALQPPVPGQYLGNRPSFSYNVVPHANSSLPTG 185
Query: 458 QPIQ 469
Q Q
Sbjct: 186 QQFQ 189
>ref|XP_020599394.1| pre-mRNA-processing protein 40C isoform X2 [Phalaenopsis equestris]
Length = 1121
Score = 70.9 bits (172), Expect = 3e-11
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
TV P + SP+ + G A++ QDS+RA F SSP YV+P PSFSY++ PR N S
Sbjct: 64 TVSPPPMSSPAQRAIHG---TASDSLQDSVRAKFVSSPGYVVPPPSFSYSIFPRVNFAS- 119
Query: 290 NSVPPGNPLQTPPFSGLK-XXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATGQP 463
G P QT LK GQ LGNR SF ++VV + +P +GQ
Sbjct: 120 -----GAPQQTSSSPALKLTPQMSPAALQPPVPGQSLGNRPSFSYSVVPLPNASPVSGQQ 174
Query: 464 IQ 469
Q
Sbjct: 175 FQ 176
>ref|XP_020599393.1| pre-mRNA-processing protein 40C isoform X1 [Phalaenopsis equestris]
Length = 1122
Score = 70.9 bits (172), Expect = 3e-11
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
TV P + SP+ + G A++ QDS+RA F SSP YV+P PSFSY++ PR N S
Sbjct: 64 TVSPPPMSSPAQRAIHG---TASDSLQDSVRAKFVSSPGYVVPPPSFSYSIFPRVNFAS- 119
Query: 290 NSVPPGNPLQTPPFSGLK-XXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATGQP 463
G P QT LK GQ LGNR SF ++VV + +P +GQ
Sbjct: 120 -----GAPQQTSSSPALKLTPQMSPAALQPPVPGQSLGNRPSFSYSVVPLPNASPVSGQQ 174
Query: 464 IQ 469
Q
Sbjct: 175 FQ 176
>ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus officinalis]
gb|ONK55246.1| uncharacterized protein A4U43_UnF6000 [Asparagus officinalis]
Length = 1105
Score = 65.1 bits (157), Expect = 3e-09
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Frame = +2
Query: 110 TVP--VPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNST 283
TVP +P +PS + + NEPT+D ++A F S YV+PAPSFSYN+ PR NS+
Sbjct: 73 TVPTVLPGSSAPSETTPVALHNSPNEPTRDPVQAKFVSPAGYVVPAPSFSYNLFPRVNSS 132
Query: 284 SGNSVPPGNPLQTP-PFSGLKXXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATG 457
+G+ L P P + L+ GQ GN SF + V A+ A+G
Sbjct: 133 AGSPQQSAMKLIPPMPAAALQ----------PPVPGQSFGNSPSFSYNVFPHANTITASG 182
Query: 458 Q 460
Q
Sbjct: 183 Q 183
>ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C [Nelumbo nucifera]
Length = 1088
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +2
Query: 122 PAIPSPSALS----QSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
P + SP+ +S G NEP Q+SIRA F + P YV+PAPSFSY+V+P+ N+ SG
Sbjct: 30 PTVASPAPVSGPSNPKGPSGTTNEPAQESIRAKFITGPGYVVPAPSFSYSVIPKQNTASG 89
Query: 290 NSV 298
+S+
Sbjct: 90 SSL 92
>ref|XP_020686530.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
ref|XP_020686532.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
ref|XP_020686533.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
gb|PKU73342.1| Pre-mRNA-processing protein 40C [Dendrobium catenatum]
Length = 1130
Score = 61.2 bits (147), Expect = 7e-08
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 119 VPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSGNSV 298
V P+ S+ +Q A++ +QD +RA F +S YV+P PSFSY+V PR +S S
Sbjct: 72 VTVSPTTSSSAQRATHGIASDSSQDPVRAKFVTSHGYVVPPPSFSYSVFPRVSSAS---- 127
Query: 299 PPGNPLQTPPFSGLK-XXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATGQPIQ 469
G P QT LK GQ LGNR SF + +V + + A+GQ Q
Sbjct: 128 --GIPQQTSSAPALKLTPQMSPAALQPPVPGQSLGNRPSFSYNIVPLPNASSASGQQFQ 184
>gb|PKA62757.1| Pre-mRNA-processing protein 40C [Apostasia shenzhenica]
Length = 1108
Score = 58.2 bits (139), Expect = 8e-07
Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +2
Query: 110 TVPVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSG 289
+ P A+P+P A SQ A++ QD +RA F +SP YV+P P F + V PR NS S
Sbjct: 70 STPFTALPAPRA-SQG----TASDLLQDPVRAKFVTSPGYVVPTP-FPHTVFPRVNSAS- 122
Query: 290 NSVPPGNPLQTPPFSGLK-XXXXXXXXXXXXXXGQFLGNR-SFPFTVVSQAHITPATGQP 463
G P QTP LK GQ L NR SF + + SQ + A+GQ
Sbjct: 123 -----GIPQQTPSAPVLKLTPPMSPAALQPPVPGQSLVNRPSFSYNIASQLNAGSASGQQ 177
Query: 464 IQ 469
Q
Sbjct: 178 FQ 179
>gb|ERN09468.1| hypothetical protein AMTR_s00029p00102340 [Amborella trichopoda]
Length = 808
Score = 57.8 bits (138), Expect = 1e-06
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +2
Query: 116 PVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSGNS 295
P P IP P N+ Q+S+RA F +SP Y++PAPSFSY VV + N+ S
Sbjct: 36 PSPPIPRPQ-----------NDQPQESVRAKFVASPGYILPAPSFSYGVVSQNNNAPRAS 84
Query: 296 VPPGNPLQTPPFSGLKXXXXXXXXXXXXXXGQFLGNRSFPFTVVSQAHITPAT-GQPIQ 469
+PP Q+ P S + SF ++V S A T AT P+Q
Sbjct: 85 LPP----QSTPLSAVSVQPPVPGH-------SATSGASFSYSVASHATTTSATASNPMQ 132
>ref|XP_020525339.1| pre-mRNA-processing protein 40C [Amborella trichopoda]
ref|XP_020525340.1| pre-mRNA-processing protein 40C [Amborella trichopoda]
Length = 1085
Score = 57.8 bits (138), Expect = 1e-06
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +2
Query: 116 PVPAIPSPSALSQSGFLVNANEPTQDSIRANFASSPSYVIPAPSFSYNVVPRFNSTSGNS 295
P P IP P N+ Q+S+RA F +SP Y++PAPSFSY VV + N+ S
Sbjct: 36 PSPPIPRPQ-----------NDQPQESVRAKFVASPGYILPAPSFSYGVVSQNNNAPRAS 84
Query: 296 VPPGNPLQTPPFSGLKXXXXXXXXXXXXXXGQFLGNRSFPFTVVSQAHITPAT-GQPIQ 469
+PP Q+ P S + SF ++V S A T AT P+Q
Sbjct: 85 LPP----QSTPLSAVSVQPPVPGH-------SATSGASFSYSVASHATTTSATASNPMQ 132