BLASTX nr result

ID: Cheilocostus21_contig00039699 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039699
         (713 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009391100.2| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   122   1e-28
ref|XP_009417798.1| PREDICTED: RING-H2 finger protein ATL43-like...   110   1e-24
ref|XP_008799433.1| PREDICTED: RING-H2 finger protein ATL43 [Pho...    97   8e-20
ref|XP_010927112.1| PREDICTED: RING-H2 finger protein ATL43-like...    97   8e-20
ref|XP_010929293.1| PREDICTED: RING-H2 finger protein ATL43-like...    90   3e-17
gb|OAY80179.1| RING-H2 finger protein ATL43 [Ananas comosus]           77   1e-12
gb|PKA51391.1| RING-H2 finger protein ATL43 [Apostasia shenzhenica]    59   2e-06

>ref|XP_009391100.2| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL43-like
           [Musa acuminata subsp. malaccensis]
          Length = 461

 Score =  122 bits (305), Expect = 1e-28
 Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRARSGS--PASPEVVASKCASEIAGVRCMPNGLET 539
           PTDLLFL+REMIIT+SGRFSASK  RA S S  P   +  AS+CASEIAGV  MP+G   
Sbjct: 359 PTDLLFLRREMIITESGRFSASKAVRALSSSTAPGDADAAASRCASEIAGVHRMPSG--R 416

Query: 538 VSAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVNGPES 401
            +  G GGARR AEEERTLRRW+GFA++RT AR  GRRE  N PE+
Sbjct: 417 ANPTGAGGARRAAEEERTLRRWMGFAAMRT-ARGLGRRESGNRPET 461


>ref|XP_009417798.1| PREDICTED: RING-H2 finger protein ATL43-like [Musa acuminata subsp.
           malaccensis]
          Length = 401

 Score =  110 bits (275), Expect = 1e-24
 Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 3/107 (2%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRARSGSPAS---PEVVASKCASEIAGVRCMPNGLE 542
           PTD+LFL+REMIIT+SGRFSASK  RA S SPA+    E+ AS+CAS IAGV  +P    
Sbjct: 302 PTDMLFLRREMIITESGRFSASKAVRALS-SPAAVVDEELDASRCASGIAGVGRVP---- 356

Query: 541 TVSAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVNGPES 401
             S    GGARR+AEEERTLRRWLGF+++RTA RW  +RE  N  E+
Sbjct: 357 --SYGATGGARRLAEEERTLRRWLGFSAMRTAVRWLWKRESGNRLET 401


>ref|XP_008799433.1| PREDICTED: RING-H2 finger protein ATL43 [Phoenix dactylifera]
          Length = 419

 Score = 97.4 bits (241), Expect = 8e-20
 Identities = 57/105 (54%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNR-ARSGSPASPEVVASKCASEIAGVRCMPNGLETV 536
           P+DLLFL+ EMIITDSGRFSAS+  R + S S    +V++ +CASEI G+      L T 
Sbjct: 321 PSDLLFLRSEMIITDSGRFSASRAGRVSGSSSGRGRDVISPRCASEITGI----TRLSTR 376

Query: 535 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVNGPES 401
           + +G G ARR+ EEERT+RRWL FA+ RT ARW G RE  +GP +
Sbjct: 377 ARSG-GCARRVEEEERTMRRWLAFAAKRT-ARWLGSRESDHGPNT 419


>ref|XP_010927112.1| PREDICTED: RING-H2 finger protein ATL43-like [Elaeis guineensis]
          Length = 422

 Score = 97.4 bits (241), Expect = 8e-20
 Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRAR-SGSPASPEVVASKCASEIAGVRCMPNGLETV 536
           P+DLLFL+ EMIITDSGRFSAS+  RA  S +    +V++++CASEI G R  P      
Sbjct: 322 PSDLLFLRSEMIITDSGRFSASRAGRASGSSTGGGRDVISARCASEITGRRRPP---IRA 378

Query: 535 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVN 413
            + G GGARR  EEERT+RRWLGFA+ R  ARW G R+  N
Sbjct: 379 HSGGGGGARREVEEERTMRRWLGFAAKR-RARWLGSRDGAN 418


>ref|XP_010929293.1| PREDICTED: RING-H2 finger protein ATL43-like [Elaeis guineensis]
          Length = 419

 Score = 90.1 bits (222), Expect = 3e-17
 Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRARSGS-PASPEVVASKCASEIAGVRCMPNGLETV 536
           P+DLLFL+ EMIITDSGRFSAS+  R    S     +V++++CASEI G+  +P    T 
Sbjct: 321 PSDLLFLRSEMIITDSGRFSASRAGRVSGSSLGGGGDVISARCASEITGISRLP----TR 376

Query: 535 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVNGPES 401
           S +G G AR   EEERT+RRWL FA+ RT ARW G RE  NG  S
Sbjct: 377 SRSG-GCARWGEEEERTMRRWLAFAAKRT-ARWLGSRE--NGSRS 417


>gb|OAY80179.1| RING-H2 finger protein ATL43 [Ananas comosus]
          Length = 384

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/103 (51%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRARSGSPASPEVVASKCASEIAGV-RCMPNGLETV 536
           P+DLLFL+ EMIITDSGRFSAS+   A  G   S     ++C SE+AGV R  P      
Sbjct: 293 PSDLLFLRSEMIITDSGRFSASRAAGASGGEVVS----GARCLSELAGVSRIAP------ 342

Query: 535 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRRERVNGP 407
           S AG G A R  EE   +RRWLGFA+ RT ARW       NGP
Sbjct: 343 SRAG-GWASRTEEERSVMRRWLGFAAKRT-ARWLRGPPGDNGP 383


>gb|PKA51391.1| RING-H2 finger protein ATL43 [Apostasia shenzhenica]
          Length = 369

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/96 (40%), Positives = 50/96 (52%)
 Frame = -2

Query: 712 PTDLLFLQREMIITDSGRFSASKVNRARSGSPASPEVVASKCASEIAGVRCMPNGLETVS 533
           P+DL+FL+ E  IT SGR SA        G       +  + +SEIAGV  +P       
Sbjct: 284 PSDLMFLRLETTITGSGRLSA-----VAGGGCGGRPWIGLRSSSEIAGVSRLP------- 331

Query: 532 AAGVGGARRIAEEERTLRRWLGFASIRTAARWPGRR 425
            +  G   R   EERT+R+WL FA+ RT ARW  RR
Sbjct: 332 MSRAGNPARPVTEERTMRKWLSFAAKRT-ARWLARR 366


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