BLASTX nr result
ID: Cheilocostus21_contig00039685
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00039685
(536 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009408751.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-30
ref|XP_017701752.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 108 4e-24
ref|XP_010909108.1| PREDICTED: pentatricopeptide repeat-containi... 108 4e-24
gb|PKU73337.1| Pentatricopeptide repeat-containing protein [Dend... 107 1e-23
ref|XP_020686540.1| pentatricopeptide repeat-containing protein ... 107 1e-23
gb|PKA66818.1| Pentatricopeptide repeat-containing protein [Apos... 105 7e-23
ref|XP_020529370.1| pentatricopeptide repeat-containing protein ... 103 2e-22
ref|XP_020529369.1| pentatricopeptide repeat-containing protein ... 103 2e-22
ref|XP_011627188.2| pentatricopeptide repeat-containing protein ... 103 2e-22
gb|ERN16194.1| hypothetical protein AMTR_s00030p00239430 [Ambore... 103 2e-22
gb|KMZ56692.1| putative Pentatricopeptide repeat-containing prot... 100 3e-21
gb|OEL29782.1| Pentatricopeptide repeat-containing protein [Dich... 99 7e-21
ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays] ... 99 7e-21
gb|KQL12706.1| hypothetical protein SETIT_021162mg [Setaria ital... 99 7e-21
ref|XP_004960011.1| pentatricopeptide repeat-containing protein ... 99 7e-21
gb|AQK47407.1| Pentatricopeptide repeat-containing protein chlor... 99 7e-21
dbj|BAS91715.1| Os04g0684500 [Oryza sativa Japonica Group] 99 9e-21
ref|XP_015635905.1| PREDICTED: pentatricopeptide repeat-containi... 99 9e-21
emb|CAJ86163.1| H0913C04.4 [Oryza sativa] >gi|125550286|gb|EAY96... 99 1e-20
ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-20
>ref|XP_009408751.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 891
Score = 125 bits (315), Expect = 4e-30
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +2
Query: 278 LQALSPEPNVEXXXXXXXXXXXXXXXXXFRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVK 457
++A +PE NVE FRVKGKIFVGN+P+W++KNE+AEFFRQFGP+K
Sbjct: 107 VEAYAPESNVEDPPSVASDPGSTTEASEFRVKGKIFVGNIPKWIRKNEIAEFFRQFGPLK 166
Query: 458 KAELIRDHDDPERNMGYCFLLYGGPT 535
K ELIRDHDDPERN+GYCFLLYGGPT
Sbjct: 167 KVELIRDHDDPERNVGYCFLLYGGPT 192
>ref|XP_017701752.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04810, chloroplastic, partial [Phoenix
dactylifera]
Length = 890
Score = 108 bits (270), Expect = 4e-24
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR KGKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ HDDPERN+GYCF++YGGPT
Sbjct: 110 FRQKGKIFVGNLPLWIKKNEIAEFFRQFGPVKSVVLIKGHDDPERNVGYCFVIYGGPT 167
>ref|XP_010909108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Elaeis guineensis]
Length = 905
Score = 108 bits (270), Expect = 4e-24
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR KGKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ HDDPERN+GYCF++YGGPT
Sbjct: 125 FRQKGKIFVGNLPLWIKKNEIAEFFRQFGPVKSVVLIKGHDDPERNVGYCFVIYGGPT 182
>gb|PKU73337.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 902
Score = 107 bits (266), Expect = 1e-23
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
+R KGKIF+GNLP W+KKNE+AEFFRQFGPVK LIR H+DPERN+GYCFL+YGGPT
Sbjct: 115 YRQKGKIFLGNLPLWIKKNEIAEFFRQFGPVKNVVLIRGHEDPERNVGYCFLIYGGPT 172
>ref|XP_020686540.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Dendrobium catenatum]
Length = 902
Score = 107 bits (266), Expect = 1e-23
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
+R KGKIF+GNLP W+KKNE+AEFFRQFGPVK LIR H+DPERN+GYCFL+YGGPT
Sbjct: 115 YRQKGKIFLGNLPLWIKKNEIAEFFRQFGPVKNVVLIRGHEDPERNVGYCFLIYGGPT 172
>gb|PKA66818.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 914
Score = 105 bits (261), Expect = 7e-23
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 365 RVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
R KGKIF+GNLP W+KKNE+AEFFRQFGPVK LIR H+DPERN+GYCFL++GGPT
Sbjct: 130 RQKGKIFIGNLPLWIKKNEIAEFFRQFGPVKNVVLIRGHEDPERNVGYCFLIFGGPT 186
>ref|XP_020529370.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic isoform X3 [Amborella trichopoda]
Length = 809
Score = 103 bits (257), Expect = 2e-22
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR +GKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ H+D ERNMGYCF++YGGPT
Sbjct: 176 FREEGKIFVGNLPLWIKKNEIAEFFRQFGPVKNVILIKGHEDSERNMGYCFVIYGGPT 233
>ref|XP_020529369.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic isoform X2 [Amborella trichopoda]
Length = 862
Score = 103 bits (257), Expect = 2e-22
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR +GKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ H+D ERNMGYCF++YGGPT
Sbjct: 176 FREEGKIFVGNLPLWIKKNEIAEFFRQFGPVKNVILIKGHEDSERNMGYCFVIYGGPT 233
>ref|XP_011627188.2| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic isoform X1 [Amborella trichopoda]
Length = 971
Score = 103 bits (257), Expect = 2e-22
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR +GKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ H+D ERNMGYCF++YGGPT
Sbjct: 176 FREEGKIFVGNLPLWIKKNEIAEFFRQFGPVKNVILIKGHEDSERNMGYCFVIYGGPT 233
>gb|ERN16194.1| hypothetical protein AMTR_s00030p00239430 [Amborella trichopoda]
Length = 972
Score = 103 bits (257), Expect = 2e-22
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR +GKIFVGNLP W+KKNE+AEFFRQFGPVK LI+ H+D ERNMGYCF++YGGPT
Sbjct: 156 FREEGKIFVGNLPLWIKKNEIAEFFRQFGPVKNVILIKGHEDSERNMGYCFVIYGGPT 213
>gb|KMZ56692.1| putative Pentatricopeptide repeat-containing protein [Zostera
marina]
Length = 930
Score = 100 bits (249), Expect = 3e-21
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGGPT 535
FR KGKIFVGNLP W+KKNE+AE+FRQ GPVK LI+ H DP RN+GYCF++YGGPT
Sbjct: 139 FRQKGKIFVGNLPLWIKKNEIAEYFRQIGPVKSVVLIKGHHDPRRNVGYCFVIYGGPT 196
>gb|OEL29782.1| Pentatricopeptide repeat-containing protein [Dichanthelium
oligosanthes]
Length = 840
Score = 99.4 bits (246), Expect = 7e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 110 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 165
>ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
ref|XP_020400845.1| pentatricopeptide repeat protein isoform X1 [Zea mays]
ref|XP_020400846.1| pentatricopeptide repeat protein isoform X1 [Zea mays]
gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 99.4 bits (246), Expect = 7e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 103 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 158
>gb|KQL12706.1| hypothetical protein SETIT_021162mg [Setaria italica]
Length = 891
Score = 99.4 bits (246), Expect = 7e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 108 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 163
>ref|XP_004960011.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Setaria italica]
ref|XP_004960012.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Setaria italica]
ref|XP_022680879.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Setaria italica]
Length = 893
Score = 99.4 bits (246), Expect = 7e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 110 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 165
>gb|AQK47407.1| Pentatricopeptide repeat-containing protein chloroplastic [Zea
mays]
Length = 906
Score = 99.4 bits (246), Expect = 7e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 103 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 158
>dbj|BAS91715.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 627
Score = 99.0 bits (245), Expect = 9e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 116 FRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 171
>ref|XP_015635905.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic isoform X2 [Oryza sativa Japonica Group]
Length = 741
Score = 99.0 bits (245), Expect = 9e-21
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 116 FRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 171
>emb|CAJ86163.1| H0913C04.4 [Oryza sativa]
gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 99.0 bits (245), Expect = 1e-20
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 115 FRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGG 170
>ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Oryza brachyantha]
Length = 901
Score = 99.0 bits (245), Expect = 1e-20
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +2
Query: 362 FRVKGKIFVGNLPRWVKKNEVAEFFRQFGPVKKAELIRDHDDPERNMGYCFLLYGG 529
FR KGK+FVGNLP W +K E+AEFFRQFGP++K EL+R HDDPERN+G+CFL YGG
Sbjct: 116 FRHKGKVFVGNLPLWARKVEIAEFFRQFGPLEKVELVRGHDDPERNLGFCFLYYGG 171