BLASTX nr result

ID: Cheilocostus21_contig00039663 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039663
         (611 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013688912.1| uncharacterized protein LOC106392656 [Brassi...    57   5e-06
ref|XP_019085128.1| PREDICTED: uncharacterized protein LOC109126...    57   5e-06
ref|XP_019092327.1| PREDICTED: uncharacterized protein LOC109129...    56   7e-06

>ref|XP_013688912.1| uncharacterized protein LOC106392656 [Brassica napus]
 ref|XP_013688914.1| uncharacterized protein LOC106392658 [Brassica napus]
          Length = 289

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/80 (37%), Positives = 42/80 (52%)
 Frame = +2

Query: 113 SLKSAYEAVQPMTNMIK*TCIVLCKGHTPCLSFFTWMLFLEKLCTRGILYKWGRCNITIC 292
           S  S Y+ ++  TN +  T  V   G  P  SFF W++ L +  TR  L  WG  + ++C
Sbjct: 103 STGSVYKKLKGETNTLPWTRAVWITGGVPKHSFFAWLVTLNRCPTRDRLRSWGLQSDSVC 162

Query: 293 LLCNDGN*SIEHIFFKSLYS 352
           LLC D   S  HI+F  +YS
Sbjct: 163 LLCGDDEESRSHIYFDCIYS 182


>ref|XP_019085128.1| PREDICTED: uncharacterized protein LOC109126280 [Camelina sativa]
          Length = 303

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = +2

Query: 113 SLKSAYEAVQPMTNMIK*TCIVLCKGHTPCLSFFTWMLFLEKLCTRGILYKWGRCNITIC 292
           S K  ++ V+  +  +  + +V  K H P  SF  W++FL +L TR  L  WG    + C
Sbjct: 110 SSKETWDQVRICSPPVSWSTVVWFKAHIPRFSFVAWLVFLARLPTRDRLRSWGMTVSSDC 169

Query: 293 LLCNDGN*SIEHIFFKSLYST 355
           +LC+ G  S EH+FF+  +S+
Sbjct: 170 VLCSGGTESHEHLFFQCPFSS 190


>ref|XP_019092327.1| PREDICTED: uncharacterized protein LOC109129138 [Camelina sativa]
          Length = 297

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/81 (37%), Positives = 44/81 (54%)
 Frame = +2

Query: 113 SLKSAYEAVQPMTNMIK*TCIVLCKGHTPCLSFFTWMLFLEKLCTRGILYKWGRCNITIC 292
           S K  +E V+  + M+    IV  K H P  SF  W+  L +L T+  L++WG    T C
Sbjct: 110 SSKETWEQVRHRSPMVPWAEIVWFKQHVPRYSFIAWLAMLNRLPTQDKLHRWGMNVPTSC 169

Query: 293 LLCNDGN*SIEHIFFKSLYST 355
           +LC+ G  S  H+FF+  +ST
Sbjct: 170 VLCSSGVESHAHLFFECPFST 190


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