BLASTX nr result

ID: Cheilocostus21_contig00039578 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039578
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018681057.1| PREDICTED: pentatricopeptide repeat-containi...    84   6e-16

>ref|XP_018681057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Musa acuminata subsp. malaccensis]
 ref|XP_018681058.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Musa acuminata subsp. malaccensis]
 ref|XP_018681059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Musa acuminata subsp. malaccensis]
 ref|XP_018681060.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Musa acuminata subsp. malaccensis]
 ref|XP_018681061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Musa acuminata subsp. malaccensis]
          Length = 890

 Score = 84.0 bits (206), Expect = 6e-16
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
 Frame = -2

Query: 263 ILLVMLKGSSSSSLI-------RYVSTSSS---ANTCRSAYSATGCVTDLLKILAPLGHA 114
           + +VM + SSS  L+       R  + +SS    ++ +   S+ G + DLL+ILAPL H 
Sbjct: 19  VFIVMFRRSSSILLLVNPAHHLRSATPTSSLYPTHSSKPICSSAGRIADLLEILAPLDHV 78

Query: 113 FRCDSHAKLYVNWLRKCLRSGDHRTVGSLHARLIARG 3
           FR D H K YVN LRKCLRSGDHR V SLHARLI RG
Sbjct: 79  FRGDFHVKGYVNSLRKCLRSGDHRMVSSLHARLITRG 115


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