BLASTX nr result

ID: Cheilocostus21_contig00039577 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039577
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009382932.1| PREDICTED: rhodanese-like domain-containing ...    63   8e-09

>ref|XP_009382932.1| PREDICTED: rhodanese-like domain-containing protein 4,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 406

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
 Frame = +2

Query: 77  MVPLQDHHFIPKPCVPLHFPAHNIRTLFPIHISNQNPRAFSVFPSPPAPIPRPTHLSTQK 256
           M  LQDH F PKP VPL FPA ++R+  P+ IS    ++ +  P P A  P     S +K
Sbjct: 1   MAALQDHRFFPKPLVPLCFPASHLRSSVPLCISIHKAKSLAQIPPPDAANPLRNLFSARK 60

Query: 257 TRTL--------FRIHVSAGKTSPSLARRPASILQFGK---KMASFIE--GPVDRSSSTQ 397
             T          RI VS+ K SP L+R   SI++F K   +  S  +    +D   STQ
Sbjct: 61  IPTFSGNPEEQTLRILVSSEKASP-LSRSLRSIIRFRKTAHRPVSLFDLLSSIDLQVSTQ 119

Query: 398 KASPFTIIP 424
           K +  + IP
Sbjct: 120 KIASCSRIP 128


Top