BLASTX nr result

ID: Cheilocostus21_contig00039440 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039440
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380717.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...    59   6e-11

>ref|XP_009380717.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Musa acuminata
           subsp. malaccensis]
          Length = 207

 Score = 58.5 bits (140), Expect(3) = 6e-11
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +2

Query: 83  FLIGASLPLLTVSTTIMIAIGCFALGLLLARKETKGSLPFLSSQIEAL 226
           F +GAS+ LL++STT++I  GCFALG L A KETK  LPF  S I +L
Sbjct: 4   FFVGASVSLLSISTTLLIGAGCFALGFLFAHKETKRGLPFPFSWIRSL 51



 Score = 32.0 bits (71), Expect(3) = 6e-11
 Identities = 20/45 (44%), Positives = 22/45 (48%)
 Frame = +3

Query: 279 ENLGEILEEFKMVIHTWTTLFFLEFQILQRLNDSKMDKGKTGSHC 413
           ENL EILE+FKMV              L   ND KM KGK  + C
Sbjct: 85  ENLAEILEDFKMV--------------LVVRNDLKMGKGKIAAQC 115



 Score = 23.5 bits (49), Expect(3) = 6e-11
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 406 PTAQCRWENCGQ 441
           P A  RWE+CGQ
Sbjct: 131 PKALSRWEDCGQ 142


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