BLASTX nr result

ID: Cheilocostus21_contig00039237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039237
         (1688 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OWM76520.1| hypothetical protein CDL15_Pgr005484 [Punica gran...    58   2e-06
dbj|GAU40766.1| hypothetical protein TSUD_26460 [Trifolium subte...    55   1e-05

>gb|OWM76520.1| hypothetical protein CDL15_Pgr005484 [Punica granatum]
          Length = 141

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 103 LRIPAGVDISMNTHLKTVKLTAKGKNPVILDHHS 2
           L I AGVDISMNTHLKTVKLT KGKNPV LDH S
Sbjct: 53  LLIAAGVDISMNTHLKTVKLTLKGKNPVTLDHLS 86


>dbj|GAU40766.1| hypothetical protein TSUD_26460 [Trifolium subterraneum]
          Length = 93

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -2

Query: 88 GVDISMNTHLKTVKLTAKGKNPVILDHHS 2
          GVDISMNTHLKTVKLT KGKNPV LDH S
Sbjct: 10 GVDISMNTHLKTVKLTLKGKNPVTLDHLS 38


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