BLASTX nr result
ID: Cheilocostus21_contig00039138
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00039138
(535 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAT16141.1| Os12g0180400, partial [Oryza sativa Japonica Group] 56 4e-07
ref|XP_017970017.1| PREDICTED: uncharacterized protein LOC186094... 56 5e-07
ref|XP_017970016.1| PREDICTED: DNA-directed RNA polymerases I, I... 56 6e-07
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 56 6e-07
emb|CDY57393.1| BnaCnng31970D [Brassica napus] 53 1e-06
gb|OMO78271.1| DNA-directed RNA polymerase, subunit N/Rpb10, par... 54 3e-06
emb|CDY66369.1| BnaUnng01450D [Brassica napus] >gi|674912706|emb... 53 3e-06
ref|XP_009406145.1| PREDICTED: DNA-directed RNA polymerase subun... 53 3e-06
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 53 3e-06
gb|PIA61886.1| hypothetical protein AQUCO_00200107v1 [Aquilegia ... 53 3e-06
ref|XP_020246937.1| DNA-directed RNA polymerases I, II, and III ... 53 3e-06
ref|XP_020253122.1| DNA-directed RNA polymerases I, II, and III ... 53 3e-06
ref|WP_071414469.1| DNA-directed RNA polymerase subunit N [Acine... 53 3e-06
ref|XP_020107410.1| DNA-directed RNA polymerase subunit 10-like ... 53 3e-06
ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, I... 53 3e-06
ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, I... 53 3e-06
ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subun... 53 3e-06
ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subun... 53 3e-06
ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subun... 53 3e-06
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 53 3e-06
>dbj|BAT16141.1| Os12g0180400, partial [Oryza sativa Japonica Group]
Length = 103
Score = 56.2 bits (134), Expect = 4e-07
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 34 GEGETEEMVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
G G EM++PVR FT GKVIGNK + YLD L ADYTEG
Sbjct: 25 GGGSASEMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEG 63
>ref|XP_017970017.1| PREDICTED: uncharacterized protein LOC18609497 isoform X2
[Theobroma cacao]
ref|XP_017970018.1| PREDICTED: uncharacterized protein LOC18609497 isoform X2
[Theobroma cacao]
ref|XP_017970019.1| PREDICTED: uncharacterized protein LOC18609497 isoform X2
[Theobroma cacao]
ref|XP_017970020.1| PREDICTED: uncharacterized protein LOC18609497 isoform X2
[Theobroma cacao]
Length = 106
Score = 55.8 bits (133), Expect = 5e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 37 EGETEEMVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
E E + M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 37 EQELKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 74
>ref|XP_017970016.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 isoform X1 [Theobroma cacao]
Length = 113
Score = 55.8 bits (133), Expect = 6e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 37 EGETEEMVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
E E + M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 37 EQELKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 74
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 55.8 bits (133), Expect = 6e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 37 EGETEEMVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
E E + M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 37 EQELKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 74
>emb|CDY57393.1| BnaCnng31970D [Brassica napus]
Length = 32
Score = 52.8 bits (125), Expect = 1e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>gb|OMO78271.1| DNA-directed RNA polymerase, subunit N/Rpb10, partial [Corchorus
capsularis]
Length = 88
Score = 53.5 bits (127), Expect = 3e-06
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 43 ETEEMVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
+ +M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 22 DKNKMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 57
>emb|CDY66369.1| BnaUnng01450D [Brassica napus]
emb|CDY20511.1| BnaC04g05330D [Brassica napus]
Length = 63
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_009406145.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Musa acuminata subsp. malaccensis]
Length = 70
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>gb|PIA61886.1| hypothetical protein AQUCO_00200107v1 [Aquilegia coerulea]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_020246937.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5-like
[Asparagus officinalis]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_020253122.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Asparagus officinalis]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|WP_071414469.1| DNA-directed RNA polymerase subunit N [Acinetobacter baumannii]
gb|OIC64897.1| DNA-directed RNA polymerase subunit N [Acinetobacter baumannii]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_020107410.1| DNA-directed RNA polymerase subunit 10-like protein [Ananas
comosus]
gb|OAY65505.1| DNA-directed RNA polymerase subunit 10-like protein [Ananas
comosus]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Beta vulgaris subsp. vulgaris]
ref|XP_021715574.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform
X1 [Chenopodium quinoa]
ref|XP_021720090.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Chenopodium quinoa]
ref|XP_021720645.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Chenopodium quinoa]
ref|XP_021736945.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Chenopodium quinoa]
ref|XP_021864613.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Spinacia oleracea]
ref|XP_021855195.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Spinacia oleracea]
ref|XP_021836872.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Spinacia oleracea]
gb|KMS97111.1| hypothetical protein BVRB_7g178930 [Beta vulgaris subsp. vulgaris]
gb|KNA17337.1| hypothetical protein SOVF_080850 [Spinacia oleracea]
gb|KNA23210.1| hypothetical protein SOVF_026860 [Spinacia oleracea]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nelumbo nucifera]
ref|XP_010242603.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nelumbo nucifera]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Brassica rapa]
ref|XP_013591461.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Brassica oleracea var. oleracea]
ref|XP_013670204.1| DNA-directed RNA polymerase subunit 10-like protein [Brassica
napus]
ref|XP_013670232.1| DNA-directed RNA polymerase subunit 10-like protein [Brassica
napus]
ref|XP_018437442.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Raphanus sativus]
emb|CDY52320.1| BnaA01g36190D [Brassica napus]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Malus domestica]
ref|XP_009366337.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Pyrus x bretschneideri]
ref|XP_009368326.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Pyrus x bretschneideri]
ref|XP_009349247.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Pyrus x bretschneideri]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera]
ref|XP_012479370.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium raimondii]
ref|XP_012438264.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium raimondii]
ref|XP_016666054.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium hirsutum]
ref|XP_016692793.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium hirsutum]
ref|XP_016735955.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium hirsutum]
ref|XP_017633698.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium arboreum]
ref|XP_017981971.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Theobroma cacao]
ref|XP_017981972.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Theobroma cacao]
ref|XP_017981973.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Theobroma cacao]
ref|XP_021279059.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Herrania umbratica]
ref|XP_022733768.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Durio
zibethinus]
emb|CBI28558.3| unnamed protein product, partial [Vitis vinifera]
gb|EOY34746.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gb|KJB31210.1| hypothetical protein B456_005G181100 [Gossypium raimondii]
gb|KJB50231.1| hypothetical protein B456_008G159800 [Gossypium raimondii]
gb|KJB50232.1| hypothetical protein B456_008G159800 [Gossypium raimondii]
gb|OMO74395.1| DNA-directed RNA polymerase, subunit N/Rpb10 [Corchorus capsularis]
gb|PPD81825.1| hypothetical protein GOBAR_DD21248 [Gossypium barbadense]
Length = 71
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 55 MVVPVRRFTFGKVIGNKCETYLDPLHADYTEG 150
M++PVR FT GKVIGNK +TYLD L ADYTEG
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEG 32