BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039112
         (458 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...    99   4e-21
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...    84   7e-16
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...    82   4e-15
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB ...    68   3e-10
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...    65   2e-09
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...    63   1e-08
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...    63   1e-08
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...    63   1e-08
ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella ...    62   4e-08
gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Ambore...    62   4e-08
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...    59   5e-07
ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-...    55   1e-05
ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-...    55   1e-05

>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
           subsp. malaccensis]
          Length = 567

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 58/140 (41%), Positives = 75/140 (53%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQS 216
           QMIGK   ++ +K E + SEADI+  ++++++  +  G  NH  A +T  FE   SLDQ 
Sbjct: 124 QMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYNVSLDQY 183

Query: 217 LHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXX 396
             TD S+ST  EP+ Q  +H ENIAVRS RQ                 VI L        
Sbjct: 184 ASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKSGSSGKK 243

Query: 397 XXXTIQEVDYSDPLRYLRGT 456
                QE+DYSDPLRYLRGT
Sbjct: 244 KRSAFQEIDYSDPLRYLRGT 263


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score = 84.0 bits (206), Expect = 7e-16
 Identities = 54/140 (38%), Positives = 72/140 (51%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQS 216
           Q+IG     K +K E  SSEAD    +++ ++ ++L    N+S   DT+  E   + D S
Sbjct: 126 QIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHE---AKDPS 182

Query: 217 LHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXX 396
             TD S  TH+E + Q  ++ E+IAVRS RQT                VIP+        
Sbjct: 183 QGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVKSGSTSKK 242

Query: 397 XXXTIQEVDYSDPLRYLRGT 456
              T QEVDYSDPLRYLRGT
Sbjct: 243 KRSTFQEVDYSDPLRYLRGT 262


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
           subsp. malaccensis]
          Length = 553

 Score = 81.6 bits (200), Expect = 4e-15
 Identities = 43/114 (37%), Positives = 64/114 (56%)
 Frame = +1

Query: 115 QQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQSLHTDTSTSTHREPDMQITKHAENIAV 294
           + +N+S  +  G+ NHS+A +T   E+  +LD+S+  D S+ST+ E +++ T++  NIAV
Sbjct: 136 ENVNLSKTEWTGMTNHSVATETTSLEDSVTLDESVRKDISSSTYNETEVEETEYCGNIAV 195

Query: 295 RSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXXXXXTIQEVDYSDPLRYLRGT 456
           RS RQT                V+ L           T+QE+DYSDPL YLRGT
Sbjct: 196 RSGRQTERRARRARAAEKAAAGVLNLKSGSSGKKKRSTLQEIDYSDPLHYLRGT 249


>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
          Length = 566

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 48/140 (34%), Positives = 64/140 (45%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQS 216
           Q+I      K +K E  SSEAD    +++  + + L    +HS   DT+  E   + D S
Sbjct: 126 QIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEPHE---AKDPS 182

Query: 217 LHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXX 396
              D S  T+ E   Q  ++ E+IAVRS RQT                VIP+        
Sbjct: 183 QDIDVSNLTNNELQSQQMQYPESIAVRSGRQTERKARRARAEEKAAVSVIPIKSGSSSKK 242

Query: 397 XXXTIQEVDYSDPLRYLRGT 456
                QE+DYSDPL YLRGT
Sbjct: 243 KRSAFQEIDYSDPLHYLRGT 262


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis
           guineensis]
          Length = 555

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 47/131 (35%), Positives = 57/131 (43%)
 Frame = +1

Query: 64  KADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQSLHTDTSTST 243
           K +K    SSEADI   ++              S A DTK  EE  + D S   D S   
Sbjct: 135 KLEKSLDFSSEADILQLER--------------STATDTKPHEEHLAKDPSQDVDISNLI 180

Query: 244 HREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXXXXXTIQEVD 423
           H E + Q   ++ +IAVRS RQT                VIP+             QE+D
Sbjct: 181 HNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVKSGSSSKKKRSAFQEID 240

Query: 424 YSDPLRYLRGT 456
           YSDPLRYLRGT
Sbjct: 241 YSDPLRYLRGT 251


>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKL-GGLNNHSLAADTKLFEEIFSLDQ 213
           QMI K    K +K E+  S+ADI+  ++  ++ ++L    NN     +T         +Q
Sbjct: 82  QMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQEEGHNTP--------NQ 133

Query: 214 SLHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
           S     S+    EPD+Q  + +ENI VRS RQ+                VI +       
Sbjct: 134 SKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGK 193

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
                 QE+DYSDPLRYLRGT
Sbjct: 194 KKRSAAQEIDYSDPLRYLRGT 214


>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKL-GGLNNHSLAADTKLFEEIFSLDQ 213
           QMI K    K +K E+  S+ADI+  ++  ++ ++L    NN     +T         +Q
Sbjct: 119 QMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQEEGHNTP--------NQ 170

Query: 214 SLHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
           S     S+    EPD+Q  + +ENI VRS RQ+                VI +       
Sbjct: 171 SKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGK 230

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
                 QE+DYSDPLRYLRGT
Sbjct: 231 KKRSAAQEIDYSDPLRYLRGT 251


>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKL-GGLNNHSLAADTKLFEEIFSLDQ 213
           QMI K    K +K E+  S+ADI+  ++  ++ ++L    NN     +T         +Q
Sbjct: 122 QMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQEEGHNTP--------NQ 173

Query: 214 SLHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
           S     S+    EPD+Q  + +ENI VRS RQ+                VI +       
Sbjct: 174 SKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGK 233

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
                 QE+DYSDPLRYLRGT
Sbjct: 234 KKRSAAQEIDYSDPLRYLRGT 254


>ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella trichopoda]
          Length = 563

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
 Frame = +1

Query: 40  MIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQSL 219
           M+G    S++DK +   SEADI   Q+  ++ ++  G  + S  A     ++  S++Q  
Sbjct: 118 MVGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLS 177

Query: 220 HTDTSTSTHREPDMQITK--HAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
             + +    RE  ++  +  H++ +AVRSRRQT                 I +       
Sbjct: 178 PNEMADKQSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSR 237

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
                +QE+DYSDPLRYLRGT
Sbjct: 238 RKRAPLQEIDYSDPLRYLRGT 258


>gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
 Frame = +1

Query: 40  MIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQSL 219
           M+G    S++DK +   SEADI   Q+  ++ ++  G  + S  A     ++  S++Q  
Sbjct: 125 MVGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLS 184

Query: 220 HTDTSTSTHREPDMQITK--HAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
             + +    RE  ++  +  H++ +AVRSRRQT                 I +       
Sbjct: 185 PNEMADKQSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSR 244

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
                +QE+DYSDPLRYLRGT
Sbjct: 245 RKRAPLQEIDYSDPLRYLRGT 265


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
 emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
          Length = 575

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
 Frame = +1

Query: 37  QMIGKTSISKAD-KPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIFSLDQ 213
           +++GK + +K++ KP S  S  D   F+++  +  +  G+   S+ A+T + +     D 
Sbjct: 131 RLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDV 190

Query: 214 SLHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXX 393
           +  +D    T  E ++   + +++I VRS RQ                 V+ +       
Sbjct: 191 TEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSR 250

Query: 394 XXXXTIQEVDYSDPLRYLRGT 456
               ++QEVDYSDPLRYLRGT
Sbjct: 251 RKRVSLQEVDYSDPLRYLRGT 271


>ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2
           [Nelumbo nucifera]
          Length = 479

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
 Frame = +1

Query: 49  KTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEI---FSLDQSL 219
           K+S    + P   SSE+ I   ++  ++  +  G  +HS+  +++  EE    FS   S 
Sbjct: 40  KSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRIDHSVGLESRQEEEQSVQFSNKDSD 99

Query: 220 HTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXXXXXX 399
             D+S    +   MQ+ K   +IAVRS RQT                V+ +         
Sbjct: 100 GLDSSDEEFKLLQMQLLK---SIAVRSGRQTERQARRARAMEKASTNVLSVKSGHSSRKR 156

Query: 400 XXTIQEVDYSDPLRYLRGT 456
              +Q++DYSDPLRYLRGT
Sbjct: 157 RAALQDIDYSDPLRYLRGT 175


>ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
           subsp. malaccensis]
          Length = 560

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
 Frame = +1

Query: 37  QMIGKTSISKADKPESSSSEADIQSFQQMNISNIKLGGLNNHSLAADTKLFEEIF---SL 207
           Q I K   +++DK    +SEA++   +++  +  +       S+   + L  E+    S 
Sbjct: 121 QKIRKNPFTESDKLNHFTSEANMHRLERVRFTETE-------SIKVMSSLIAEVHQENST 173

Query: 208 DQSLHTDTSTSTHREPDMQITKHAENIAVRSRRQTXXXXXXXXXXXXXXXYVIPLXXXXX 387
           +     D     H E +++   H++ IAVRS RQT                VI +     
Sbjct: 174 ENPSEIDVFNLMHSEIEIKEMCHSKGIAVRSGRQTERRAKRARAAKKDASGVINVKRGTS 233

Query: 388 XXXXXXTIQEVDYSDPLRYLRGT 456
                 + QEVDYSDPLRYLRGT
Sbjct: 234 GKKKRSSFQEVDYSDPLRYLRGT 256