BLASTX nr result

ID: Cheilocostus21_contig00039008 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039008
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containin...    96   7e-20

>ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 1689

 Score = 95.5 bits (236), Expect = 7e-20
 Identities = 63/145 (43%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
 Frame = +2

Query: 2    GSGSATSVAVADTNKNFGKVDNLNEPSLAIQQRKPFGYSSTVSSGSFMKKSQFFEXXXXX 181
            GSGS  S+A +  N+NFGKVDNL+EPS A +Q KPF  ++T  SGSFMKKS FFE     
Sbjct: 1172 GSGSTASLATSGANQNFGKVDNLDEPSWASKQEKPFESNATTLSGSFMKKSHFFESSCPS 1231

Query: 182  XXXXXERDDSSPVKMNE-RASQKWGGACGIVDAES-----DNTLLVSRQFDPNVSCLSAE 343
                 ERDD    +++E     KW  A G   AES     D T+L S   D  +S LS++
Sbjct: 1232 PTPSSERDDIPLSQISEPDPDDKWNEASGTPTAESEAIAPDTTVLASMPLD--LSVLSSQ 1289

Query: 344  VENTQSLLKPKNERADKITELTSLS 418
            V      ++  +E AD+ TE+ +LS
Sbjct: 1290 V------VRSMDEVADQSTEIENLS 1308


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