BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038812
         (605 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo...   227   5e-71
gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo...   218   2e-67
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   228   3e-67
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...   225   5e-67
gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group...   222   7e-67
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   228   7e-67
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   231   1e-66
emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group]         225   3e-66
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   230   3e-66
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   230   3e-66
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   230   3e-66
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   230   3e-66
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   230   3e-66
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   229   4e-66
gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-...   221   8e-66
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         219   8e-66
gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subc...   221   8e-66
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   228   1e-65
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   228   1e-65
emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]         228   1e-65

>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  227 bits (578), Expect = 5e-71
 Identities = 109/183 (59%), Positives = 142/183 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+IK+ + + L+QSHY  KI++KF +     VSTP DPS+ L+KNIG  ++  +Y++ IG
Sbjct: 44  KLIKNHDGIVLTQSHYIEKILKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIG 103

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SLL+LSN +RPDI+YAV RL RYT NP   HW AL+R+FRYLKGT + G+ +  YP V+E
Sbjct: 104 SLLHLSNFSRPDIAYAVGRLGRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIE 163

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           GF DANWISDS++ KSTSGYVF L GGA+ W+S+KQ+IISRSTMEAE++ALD    EAE+
Sbjct: 164 GFCDANWISDSDETKSTSGYVFTLAGGAVAWKSAKQTIISRSTMEAEIIALDTASSEAEF 223

Query: 65  LKN 57
           LKN
Sbjct: 224 LKN 226


>gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 322

 Score =  218 bits (555), Expect = 2e-67
 Identities = 102/183 (55%), Positives = 143/183 (78%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+++  +++ LSQ HY  + ++KF +    SV+TP D +  L++N G  + Q +YA+ IG
Sbjct: 37  KVVRKGDSILLSQGHYVERFLKKFDYYDCKSVTTPYDVNSPLKQNKGESLAQSQYAQIIG 96

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SLL+L N +RPDI+YAVSRLSRYT  P++ HW+AL R+ RYL+GT   G+ ++G+P+VLE
Sbjct: 97  SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 156

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SDANWIS+S++ KSTSGYVF LGGGAI W+S +QSII+RSTME+E VAL++T  EAEW
Sbjct: 157 GYSDANWISNSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEW 216

Query: 65  LKN 57
           L+N
Sbjct: 217 LRN 219


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  228 bits (580), Expect = 3e-67
 Identities = 108/183 (59%), Positives = 143/183 (78%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 420 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 479

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 480 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 539

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 540 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 599

Query: 65  LKN 57
           L++
Sbjct: 600 LRD 602


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score =  225 bits (574), Expect = 5e-67
 Identities = 107/183 (58%), Positives = 142/183 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 322 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 381

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 382 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 441

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RS MEAEL ALD   +EAEW
Sbjct: 442 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSIMEAELTALDTATVEAEW 501

Query: 65  LKN 57
           L++
Sbjct: 502 LRD 504


>gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group]
 gb|AAT94012.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 493

 Score =  222 bits (565), Expect = 7e-67
 Identities = 105/181 (58%), Positives = 140/181 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI  +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 116 KLIRGENGITLLQSHYVEKIFNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 175

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LS++T+NP + HW A++RV RYLKGT   GL ++GYP+VLE
Sbjct: 176 SLMYLASATRPDISFAVSKLSQFTSNPGDDHWRAVERVMRYLKGTMELGLHYSGYPAVLE 235

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 236 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 295

Query: 65  L 63
           L
Sbjct: 296 L 296


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  228 bits (580), Expect = 7e-67
 Identities = 108/183 (59%), Positives = 143/183 (78%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 451 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 510

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 511 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 570

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 571 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 630

Query: 65  LKN 57
           L++
Sbjct: 631 LRD 633


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU90098.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  231 bits (589), Expect = 1e-66
 Identities = 109/183 (59%), Positives = 145/183 (79%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD+  +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDIATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group]
          Length = 722

 Score =  225 bits (574), Expect = 3e-66
 Identities = 107/181 (59%), Positives = 140/181 (77%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 532  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 591

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 592  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVIRYLKGTMELGLHYTGYPAVLE 651

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+T GYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 652  GYSDSNWISDVDEIKATGGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 711

Query: 65   L 63
            L
Sbjct: 712  L 712


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  230 bits (586), Expect = 3e-66
 Identities = 109/183 (59%), Positives = 144/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  230 bits (586), Expect = 3e-66
 Identities = 109/183 (59%), Positives = 144/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  230 bits (586), Expect = 3e-66
 Identities = 109/183 (59%), Positives = 144/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  230 bits (586), Expect = 3e-66
 Identities = 109/183 (59%), Positives = 144/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  230 bits (586), Expect = 3e-66
 Identities = 109/183 (59%), Positives = 144/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+SL KN  +  NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 65   LKN 57
            L++
Sbjct: 1207 LRD 1209


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  229 bits (585), Expect = 4e-66
 Identities = 111/183 (60%), Positives = 142/183 (77%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+IK  + +TLSQSHY  K++ +F       V+TP DPS +L K  G P+NQ  Y++ IG
Sbjct: 1034 KLIKGEDGITLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIG 1093

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YLS+ TRPDISYAV RL+RY+ +P + HW AL RV RYLKG  + G+++TG+PSVLE
Sbjct: 1094 SLMYLSSATRPDISYAVCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLE 1153

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            GFSDANWISDS+ +KSTSGYVF L GGA++W+SSKQS+ +RST EAELVALD   LEAEW
Sbjct: 1154 GFSDANWISDSDQMKSTSGYVFTLAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEW 1213

Query: 65   LKN 57
            L++
Sbjct: 1214 LRD 1216


>gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 570

 Score =  221 bits (563), Expect = 8e-66
 Identities = 105/183 (57%), Positives = 141/183 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 362 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIG 421

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLK T   GL ++GYP+VLE
Sbjct: 422 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLE 481

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGG ++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 482 GYSDSNWISDVDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEW 541

Query: 65  LKN 57
           L++
Sbjct: 542 LRD 544


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  219 bits (557), Expect = 8e-66
 Identities = 104/183 (56%), Positives = 141/183 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 214 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLLKNKRIAKNQLEYSQIIG 273

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLK T   GL +TGYP++LE
Sbjct: 274 SLMYLASTTRPDISFAVSKLSRFTSNPRDDHWRALERVMRYLKRTMELGLHYTGYPAILE 333

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            +SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL  LD + +EAEW
Sbjct: 334 EYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTGLDTSTVEAEW 393

Query: 65  LKN 57
           L++
Sbjct: 394 LRD 396


>gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 572

 Score =  221 bits (563), Expect = 8e-66
 Identities = 105/183 (57%), Positives = 141/183 (77%)
 Frame = -1

Query: 605 KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
           K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 364 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIG 423

Query: 425 SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
           SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLK T   GL ++GYP+VLE
Sbjct: 424 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLE 483

Query: 245 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
           G+SD+NWISD ++IK+TSGYVF LGGG ++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 484 GYSDSNWISDVDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEW 543

Query: 65  LKN 57
           L++
Sbjct: 544 LRD 546


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  228 bits (580), Expect = 1e-65
 Identities = 108/183 (59%), Positives = 143/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 820  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 879

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 880  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 939

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 940  GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 999

Query: 65   LKN 57
            L++
Sbjct: 1000 LRD 1002


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  228 bits (581), Expect = 1e-65
 Identities = 108/183 (59%), Positives = 143/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 960  KLIRGENEITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 1019

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1020 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1079

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 1080 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1139

Query: 65   LKN 57
            L++
Sbjct: 1140 LRD 1142


>emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
          Length = 1113

 Score =  228 bits (580), Expect = 1e-65
 Identities = 108/183 (59%), Positives = 143/183 (78%)
 Frame = -1

Query: 605  KIIKSSNTLTLSQSHYTIKIIEKFRFNKYSSVSTPLDPSVSLEKNIGMPINQEEYAKCIG 426
            K+I+  N +TL QSHY  KI+ +F +       TP DPS+ L KN  +  NQ EY++ IG
Sbjct: 820  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 879

Query: 425  SLLYLSNRTRPDISYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLRFTGYPSVLE 246
            SL+YL++ TRPDIS+AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 880  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 939

Query: 245  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIISRSTMEAELVALDVTCLEAEW 66
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I++RSTMEAEL ALD   +EAEW
Sbjct: 940  GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 999

Query: 65   LKN 57
            L++
Sbjct: 1000 LRD 1002