BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038811
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo...   229   8e-72
gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo...   225   3e-70
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   234   9e-68
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   228   2e-67
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...   226   2e-67
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   228   3e-67
gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group...   222   6e-67
ref|XP_014629594.1| PREDICTED: uncharacterized protein LOC106798...   224   1e-66
ref|XP_019173288.1| PREDICTED: uncharacterized protein LOC109168...   230   2e-66
emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group]         226   2e-66
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   230   2e-66
gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-...   222   3e-66
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         219   3e-66
gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subc...   222   4e-66
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   229   5e-66
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   229   5e-66
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   229   5e-66
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   229   5e-66
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   229   5e-66
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   228   6e-66

>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  229 bits (583), Expect = 8e-72
 Identities = 110/184 (59%), Positives = 144/184 (78%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+IK+ + + L+QSHY  KI++KF +     VSTP DPS+ L+KNIG+ ++  +Y++ IG
Sbjct: 44  KLIKNHDGIVLTQSHYIEKILKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIG 103

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SLL+LSN +RPDIAYAV RL RYT NP   HW AL+R+FRYLKGT + G+ +  YP V+E
Sbjct: 104 SLLHLSNFSRPDIAYAVGRLGRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIE 163

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           GF DANWISDS++ KSTSGYVF L GGA+ W+S+KQ+II+RSTMEAE++ALD    EAE+
Sbjct: 164 GFCDANWISDSDETKSTSGYVFTLAGGAVAWKSAKQTIISRSTMEAEIIALDTASSEAEF 223

Query: 56  LKNL 45
           LKNL
Sbjct: 224 LKNL 227


>gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 322

 Score =  225 bits (574), Expect = 3e-70
 Identities = 105/183 (57%), Positives = 146/183 (79%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+++  +++ LSQ HY  + ++KF +    SV+TP D + PL++N G+ + Q +YA+ IG
Sbjct: 37  KVVRKGDSILLSQGHYVERFLKKFDYYDCKSVTTPYDVNSPLKQNKGESLAQSQYAQIIG 96

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SLL+L N +RPDIAYAVSRLSRYT  P++ HW+AL R+ RYL+GT   G++++G+P+VLE
Sbjct: 97  SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 156

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SDANWIS+S++ KSTSGYVF LGGGAI W+S +QSIIARSTME+E VAL++T  EAEW
Sbjct: 157 GYSDANWISNSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEW 216

Query: 56  LKN 48
           L+N
Sbjct: 217 LRN 219


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  234 bits (597), Expect = 9e-68
 Identities = 113/184 (61%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+IK  + +TLSQSHY  K++ +FG      V+TP DPS  L K  G+P+NQ  Y++ IG
Sbjct: 1034 KLIKGEDGITLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIG 1093

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YLS+ TRPDI+YAV RL+RY+ +P + HW AL RV RYLKG  + G+K+TG+PSVLE
Sbjct: 1094 SLMYLSSATRPDISYAVCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLE 1153

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            GFSDANWISDS+ +KSTSGYVF L GGA++W+SSKQS+  RST EAELVALD   LEAEW
Sbjct: 1154 GFSDANWISDSDQMKSTSGYVFTLAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEW 1213

Query: 56   LKNL 45
            L++L
Sbjct: 1214 LRDL 1217


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  228 bits (582), Expect = 2e-67
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 420 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 479

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 480 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 539

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 540 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 599

Query: 56  LKNL 45
           L++L
Sbjct: 600 LRDL 603


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score =  226 bits (576), Expect = 2e-67
 Identities = 108/184 (58%), Positives = 142/184 (77%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 322 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 381

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 382 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 441

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RS MEAEL ALD   +EAEW
Sbjct: 442 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSIMEAELTALDTATVEAEW 501

Query: 56  LKNL 45
           L++L
Sbjct: 502 LRDL 505


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 764

 Score =  228 bits (582), Expect = 3e-67
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 451  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 510

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 511  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 570

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 571  GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 630

Query: 56   LKNL 45
            L++L
Sbjct: 631  LRDL 634


>gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group]
 gb|AAT94012.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 493

 Score =  222 bits (565), Expect = 6e-67
 Identities = 106/184 (57%), Positives = 141/184 (76%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI  +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 116 KLIRGENGITLLQSHYVEKIFNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 175

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LS++T+NP + HW A++RV RYLKGT   GL ++GYP+VLE
Sbjct: 176 SLMYLASATRPDISFAVSKLSQFTSNPGDDHWRAVERVMRYLKGTMELGLHYSGYPAVLE 235

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 236 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 295

Query: 56  LKNL 45
           L +L
Sbjct: 296 LCDL 299


>ref|XP_014629594.1| PREDICTED: uncharacterized protein LOC106798148 [Glycine max]
          Length = 612

 Score =  224 bits (570), Expect = 1e-66
 Identities = 106/184 (57%), Positives = 143/184 (77%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+IK ++ + L+QSHY  K+++KF +     VSTP D S+ L+KN+ K I+  +Y++ IG
Sbjct: 411 KLIKKNDGMILTQSHYVEKLLKKFNYFDVKPVSTPYDSSIKLKKNLDKGISSHKYSQIIG 470

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SLL+ +N +RPDIAYAV RL RYT NP   HW AL+RVFRYLKGT + G+ +T +P+V+E
Sbjct: 471 SLLHFTNFSRPDIAYAVGRLGRYTNNPDHSHWIALERVFRYLKGTINYGIHYTCFPAVIE 530

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           GFSDANWISDS++ KSTSGYVF L GGA++W+S+KQ+II+  TMEAE++ALD    EAE+
Sbjct: 531 GFSDANWISDSDETKSTSGYVFTLAGGAVSWKSAKQTIISHFTMEAEIIALDTATSEAEF 590

Query: 56  LKNL 45
           LKNL
Sbjct: 591 LKNL 594


>ref|XP_019173288.1| PREDICTED: uncharacterized protein LOC109168888 [Ipomoea nil]
          Length = 1079

 Score =  230 bits (586), Expect = 2e-66
 Identities = 110/184 (59%), Positives = 141/184 (76%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+S +   LSQSHYT K++ KF   + +   TP D SV L K+ G  + QE+YAK IG
Sbjct: 807  KVIQSGSNYKLSQSHYTEKLLRKFNSFEVTPAPTPYDSSVKLTKHTGTGVAQEDYAKIIG 866

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL++L N TRPDIA AV+RLSRYT NPSE HW ALKRV RYL+GT   GL +TG+P+VLE
Sbjct: 867  SLMFLMNYTRPDIALAVNRLSRYTHNPSEAHWHALKRVLRYLRGTVEWGLNYTGFPNVLE 926

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+ DANW++DS+D+ STSGYVF +G  A++W+S+KQS IARSTMEAE +ALD+   E+EW
Sbjct: 927  GYCDANWVNDSDDVSSTSGYVFTMGEAAVSWKSTKQSCIARSTMEAEFIALDLAGQESEW 986

Query: 56   LKNL 45
            L+NL
Sbjct: 987  LRNL 990


>emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group]
          Length = 722

 Score =  226 bits (575), Expect = 2e-66
 Identities = 108/184 (58%), Positives = 141/184 (76%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 532  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 591

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 592  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVIRYLKGTMELGLHYTGYPAVLE 651

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+T GYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 652  GYSDSNWISDVDEIKATGGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 711

Query: 56   LKNL 45
            L +L
Sbjct: 712  LLDL 715


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU90098.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  230 bits (587), Expect = 2e-66
 Identities = 109/184 (59%), Positives = 144/184 (78%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD+  +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDIATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 570

 Score =  222 bits (565), Expect = 3e-66
 Identities = 106/184 (57%), Positives = 141/184 (76%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 362 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIG 421

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLK T   GL ++GYP+VLE
Sbjct: 422 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLE 481

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SD+NWISD ++IK+TSGYVF LGGG ++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 482 GYSDSNWISDVDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEW 541

Query: 56  LKNL 45
           L++L
Sbjct: 542 LRDL 545


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  219 bits (559), Expect = 3e-66
 Identities = 105/184 (57%), Positives = 141/184 (76%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 214 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLLKNKRIAKNQLEYSQIIG 273

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLK T   GL +TGYP++LE
Sbjct: 274 SLMYLASTTRPDISFAVSKLSRFTSNPRDDHWRALERVMRYLKRTMELGLHYTGYPAILE 333

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            +SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL  LD + +EAEW
Sbjct: 334 EYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTGLDTSTVEAEW 393

Query: 56  LKNL 45
           L++L
Sbjct: 394 LRDL 397


>gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 572

 Score =  222 bits (565), Expect = 4e-66
 Identities = 106/184 (57%), Positives = 141/184 (76%)
 Frame = -1

Query: 596 KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
           K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 364 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIG 423

Query: 416 SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
           SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLK T   GL ++GYP+VLE
Sbjct: 424 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLE 483

Query: 236 GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
           G+SD+NWISD ++IK+TSGYVF LGGG ++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 484 GYSDSNWISDVDEIKATSGYVFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEW 543

Query: 56  LKNL 45
           L++L
Sbjct: 544 LRDL 547


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  229 bits (584), Expect = 5e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  229 bits (584), Expect = 5e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  229 bits (584), Expect = 5e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  229 bits (584), Expect = 5e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  229 bits (584), Expect = 5e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 1027 KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIG 1086

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 1087 SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 56   LKNL 45
            L++L
Sbjct: 1207 LRDL 1210


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  228 bits (582), Expect = 6e-66
 Identities = 109/184 (59%), Positives = 143/184 (77%)
 Frame = -1

Query: 596  KIIKSSNTLTLSQSHYTIKIIEKFGFNKYSSVSTPLDPSVPLEKNIGKPINQEEYAKCIG 417
            K+I+  N +TL QSHY  KI+ +FG+       TP DPS+ L KN     NQ EY++ IG
Sbjct: 820  KLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIG 879

Query: 416  SLLYLSNRTRPDIAYAVSRLSRYTTNPSEIHWDALKRVFRYLKGTNSCGLKFTGYPSVLE 237
            SL+YL++ TRPDI++AVS+LSR+T+NP + HW AL+RV RYLKGT   GL +TGYP+VLE
Sbjct: 880  SLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 939

Query: 236  GFSDANWISDSNDIKSTSGYVFLLGGGAITWQSSKQSIIARSTMEAELVALDVTCLEAEW 57
            G+SD+NWISD ++IK+TSGYVF LGGGA++W+S KQ+I+ RSTMEAEL ALD   +EAEW
Sbjct: 940  GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 999

Query: 56   LKNL 45
            L++L
Sbjct: 1000 LRDL 1003