BLASTX nr result

ID: Cheilocostus21_contig00038723 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038723
         (560 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777748.1| PREDICTED: putative ABC transporter C family...    64   1e-08
ref|XP_019703353.1| PREDICTED: ABC transporter C family member 5...    60   2e-07

>ref|XP_008777748.1| PREDICTED: putative ABC transporter C family member 15 [Phoenix
           dactylifera]
          Length = 1451

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +3

Query: 312 MLADYLDVVAFSLLFIWVTLDFTIFSPSM-EPGETGEGLVQKKRNVLVEITVACHILISV 488
           ++ +Y D+VAFSLL  W+TL+F     +  E G  GEG   ++  VL  +   C+ILIS+
Sbjct: 3   VVKEYFDIVAFSLLVSWITLEFVRLRKAFPEGGVVGEGSAGRRYRVLDWVIALCNILISI 62

Query: 489 FHLCFSVYRFWKLGSI-PVGYVF 554
            +L F ++  WKL ++ P+G VF
Sbjct: 63  IYLGFCIHETWKLKTVPPLGLVF 85


>ref|XP_019703353.1| PREDICTED: ABC transporter C family member 5-like, partial [Elaeis
           guineensis]
          Length = 678

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +3

Query: 321 DYLDVVAFSLLFIWVTLDFTIFSPSM-EPGETGEGLVQKKRNVLVEITVACHILISVFHL 497
           +Y ++VAFSLL  W+T +F     ++ E G  GEG   K   VL  +   C+ILIS+ +L
Sbjct: 7   EYFNMVAFSLLVSWITAEFVRLRKALPEGGGVGEGSAGKTYMVLDWLIALCNILISIIYL 66

Query: 498 CFSVYRFWKLGSI-PVGYVF 554
            F ++  WKL ++ P+G+VF
Sbjct: 67  GFCIHETWKLKTVPPLGFVF 86


Top