BLASTX nr result

ID: Cheilocostus21_contig00038667 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038667
         (544 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417590.1| PREDICTED: RNA-binding protein 38 isoform X1...   109   6e-26
ref|XP_010937422.1| PREDICTED: probable RNA-binding protein ARP1...    64   4e-09
ref|XP_010937421.1| PREDICTED: probable RNA-binding protein ARP1...    64   5e-09
ref|XP_010937420.1| PREDICTED: RNA-binding protein 24 isoform X1...    64   7e-09
ref|XP_018682277.1| PREDICTED: RNA-binding protein 38-like isofo...    64   9e-09
ref|XP_009414023.1| PREDICTED: RNA-binding protein 38 [Musa acum...    62   3e-08
ref|XP_008790893.1| PREDICTED: RNA-binding protein 38 isoform X2...    60   2e-07
ref|XP_008790892.1| PREDICTED: RNA-binding protein 38 isoform X1...    60   2e-07
ref|XP_018674097.1| PREDICTED: RNA-binding protein 38 isoform X2...    58   5e-07
gb|OAY78131.1| putative RNA-binding protein ARP1 [Ananas comosus]      58   7e-07
ref|XP_017701984.1| PREDICTED: RNA-binding protein 38-like isofo...    58   1e-06
ref|XP_017701983.1| PREDICTED: RNA-binding protein 38-like isofo...    58   1e-06
ref|XP_020083075.1| RNA-binding protein 38-like isoform X2 [Anan...    58   1e-06
ref|XP_020083074.1| RNA-binding protein 38-like isoform X1 [Anan...    58   1e-06

>ref|XP_009417590.1| PREDICTED: RNA-binding protein 38 isoform X1 [Musa acuminata subsp.
           malaccensis]
 ref|XP_018674096.1| PREDICTED: RNA-binding protein 38 isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 273

 Score =  109 bits (273), Expect = 6e-26
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           MQSPRA FPSL QGPRPPY+   P  PHM+G  +P   SSSQQHP  LQ PPHARQ P S
Sbjct: 196 MQSPRAGFPSLAQGPRPPYMQQHPA-PHMQGSFIP---SSSQQHPFQLQPPPHARQ-PLS 250

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
           TA+D Q PQQP  +GANTDNQD
Sbjct: 251 TAVDLQAPQQPSTAGANTDNQD 272


>ref|XP_010937422.1| PREDICTED: probable RNA-binding protein ARP1 isoform X3 [Elaeis
           guineensis]
          Length = 220

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 41/78 (52%), Positives = 47/78 (60%)
 Frame = -1

Query: 532 RASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQSTAID 353
           RASF S+ Q PRPPY+ Y PTV  MEG   P   SSSQ +   LQ PPH RQ P +  ID
Sbjct: 149 RASFSSMLQNPRPPYMQY-PTV-QMEGSISP---SSSQPYTFQLQPPPHVRQPPNT--ID 201

Query: 352 SQVPQQPCASGANTDNQD 299
           SQ  QQP  + A T+  D
Sbjct: 202 SQDSQQPTTTVATTEGAD 219


>ref|XP_010937421.1| PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Elaeis
           guineensis]
          Length = 227

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 41/78 (52%), Positives = 47/78 (60%)
 Frame = -1

Query: 532 RASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQSTAID 353
           RASF S+ Q PRPPY+ Y PTV  MEG   P   SSSQ +   LQ PPH RQ P +  ID
Sbjct: 156 RASFSSMLQNPRPPYMQY-PTV-QMEGSISP---SSSQPYTFQLQPPPHVRQPPNT--ID 208

Query: 352 SQVPQQPCASGANTDNQD 299
           SQ  QQP  + A T+  D
Sbjct: 209 SQDSQQPTTTVATTEGAD 226


>ref|XP_010937420.1| PREDICTED: RNA-binding protein 24 isoform X1 [Elaeis guineensis]
          Length = 268

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 41/78 (52%), Positives = 47/78 (60%)
 Frame = -1

Query: 532 RASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQSTAID 353
           RASF S+ Q PRPPY+ Y PTV  MEG   P   SSSQ +   LQ PPH RQ P +  ID
Sbjct: 197 RASFSSMLQNPRPPYMQY-PTV-QMEGSISP---SSSQPYTFQLQPPPHVRQPPNT--ID 249

Query: 352 SQVPQQPCASGANTDNQD 299
           SQ  QQP  + A T+  D
Sbjct: 250 SQDSQQPTTTVATTEGAD 267


>ref|XP_018682277.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 267

 Score = 63.5 bits (153), Expect = 9e-09
 Identities = 37/81 (45%), Positives = 50/81 (61%)
 Frame = -1

Query: 541 QSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQST 362
           Q+ RASFPS GQGPRPP +     VP           +SSQQ+P  L+ P  ARQ P +T
Sbjct: 203 QTGRASFPSPGQGPRPPLM-----VP-----------TSSQQYPFQLRSPSQARQ-PLNT 245

Query: 361 AIDSQVPQQPCASGANTDNQD 299
            +DS+ P+Q   +G++TD+QD
Sbjct: 246 IVDSRAPEQTSTAGSDTDDQD 266


>ref|XP_009414023.1| PREDICTED: RNA-binding protein 38 [Musa acuminata subsp.
           malaccensis]
          Length = 264

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 39/83 (46%), Positives = 48/83 (57%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           +Q+ RA FPS        Y+ Y    PHMEG  +P   SSSQQ+P  LQ PPHAR QP +
Sbjct: 194 LQTARAGFPS-------HYMQYP--APHMEGTFIP---SSSQQYPFQLQPPPHAR-QPLN 240

Query: 364 TAIDSQVPQQPCASGANTDNQDD 296
           T   SQ PQQ    GA++D+  D
Sbjct: 241 TTEGSQAPQQLSTPGADSDDNQD 263


>ref|XP_008790893.1| PREDICTED: RNA-binding protein 38 isoform X2 [Phoenix dactylifera]
          Length = 271

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/82 (46%), Positives = 46/82 (56%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           M +PRASF S  Q P PPY+ Y    P +  +G  +P SSSQ +   LQ PPH RQ P  
Sbjct: 197 MATPRASFSSAPQSPHPPYMRY----PMVSVEGSISP-SSSQPYTFQLQPPPHGRQPP-- 249

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
             IDS   QQ   + ANT+N D
Sbjct: 250 NMIDSPTSQQ-STTAANTENAD 270


>ref|XP_008790892.1| PREDICTED: RNA-binding protein 38 isoform X1 [Phoenix dactylifera]
          Length = 272

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/82 (46%), Positives = 46/82 (56%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           M +PRASF S  Q P PPY+ Y    P +  +G  +P SSSQ +   LQ PPH RQ P  
Sbjct: 198 MATPRASFSSAPQSPHPPYMRY----PMVSVEGSISP-SSSQPYTFQLQPPPHGRQPP-- 250

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
             IDS   QQ   + ANT+N D
Sbjct: 251 NMIDSPTSQQ-STTAANTENAD 271


>ref|XP_018674097.1| PREDICTED: RNA-binding protein 38 isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 223

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 37/77 (48%), Positives = 43/77 (55%)
 Frame = -3

Query: 542 AVS*GKLSFARAGPSSPILALFPYSTPHGXXXXXXXXXXXXATPNSAPAPSTCKATAPEH 363
           A S G++SF+   P++ I A     TPH              TP SAP P+TCKAT PEH
Sbjct: 151 AKSQGRVSFSSTRPTATIHAAAS-CTPHAGVLHSLLLAT---TPVSAPTPTTCKAT-PEH 205

Query: 362 SYRFTSSSAALRKWSKH 312
           S R TSSSA L  WSKH
Sbjct: 206 SSRLTSSSATLHSWSKH 222


>gb|OAY78131.1| putative RNA-binding protein ARP1 [Ananas comosus]
          Length = 215

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 37/82 (45%), Positives = 45/82 (54%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           M +PR SF S    P PPY+ Y PT   MEG   P  L S+ Q    LQ PPH RQQP +
Sbjct: 140 MPNPRTSFQSPQHRPHPPYIQY-PTA-QMEGPFPPPSLPSNFQ----LQHPPHVRQQPLN 193

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
              DS   Q P A+G+N ++ D
Sbjct: 194 IT-DSHASQPPSAAGSNAESTD 214


>ref|XP_017701984.1| PREDICTED: RNA-binding protein 38-like isoform X4 [Phoenix
           dactylifera]
          Length = 264

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
 Frame = -1

Query: 538 SPRASFPSLG----------QGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPP 389
           SP   +P +G          Q PRPPY+ Y PTV HMEG   P   SSSQ     LQ PP
Sbjct: 181 SPPYHYPHMGYTVPTSRATLQNPRPPYMQY-PTV-HMEGSISP---SSSQPSTFQLQPPP 235

Query: 388 HARQQPQSTAIDSQVPQQPCASGANTD 308
           H RQ P +  IDSQ  QQP  + A T+
Sbjct: 236 HVRQPPNT--IDSQASQQPTTTIATTE 260


>ref|XP_017701983.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Phoenix
           dactylifera]
          Length = 271

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
 Frame = -1

Query: 538 SPRASFPSLG----------QGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPP 389
           SP   +P +G          Q PRPPY+ Y PTV HMEG   P   SSSQ     LQ PP
Sbjct: 188 SPPYHYPHMGYTVPTSRATLQNPRPPYMQY-PTV-HMEGSISP---SSSQPSTFQLQPPP 242

Query: 388 HARQQPQSTAIDSQVPQQPCASGANTD 308
           H RQ P +  IDSQ  QQP  + A T+
Sbjct: 243 HVRQPPNT--IDSQASQQPTTTIATTE 267


>ref|XP_020083075.1| RNA-binding protein 38-like isoform X2 [Ananas comosus]
          Length = 273

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/82 (45%), Positives = 45/82 (54%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           M +PR SF S    P PPY+ Y PT   MEG   P  L S+ Q    LQ PPH RQQP +
Sbjct: 198 MPNPRTSFQSPQHRPHPPYIQY-PTA-QMEGPFPPPSLPSNFQ----LQHPPHVRQQPLN 251

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
              DS   Q P A+G+N ++ D
Sbjct: 252 IT-DSHASQPPSAAGSNAESTD 272


>ref|XP_020083074.1| RNA-binding protein 38-like isoform X1 [Ananas comosus]
          Length = 279

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/82 (45%), Positives = 45/82 (54%)
 Frame = -1

Query: 544 MQSPRASFPSLGQGPRPPYLHYSPTVPHMEGQGLPAPLSSSQQHPILLQLPPHARQQPQS 365
           M +PR SF S    P PPY+ Y PT   MEG   P  L S+ Q    LQ PPH RQQP +
Sbjct: 204 MPNPRTSFQSPQHRPHPPYIQY-PTA-QMEGPFPPPSLPSNFQ----LQHPPHVRQQPLN 257

Query: 364 TAIDSQVPQQPCASGANTDNQD 299
              DS   Q P A+G+N ++ D
Sbjct: 258 IT-DSHASQPPSAAGSNAESTD 278


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