BLASTX nr result

ID: Cheilocostus21_contig00038366 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038366
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009392940.1| PREDICTED: zinc finger CCHC domain-containin...    71   1e-10
ref|XP_009392939.1| PREDICTED: zinc finger CCHC domain-containin...    70   1e-10

>ref|XP_009392940.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 394

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/81 (51%), Positives = 50/81 (61%)
 Frame = +1

Query: 406 IMSIPFASHGISTLLFPPGRWKKKNMSAGSFLTTLWPNSIAHLVLHWRAPKSINQDSAHP 585
           ++SI FAS  +S L  P GRWKKK  S G     L  N +  LV  W  P S +QDSA  
Sbjct: 1   MLSIRFASLRVSAL--PSGRWKKKR-SGGIVPAILEANRMVRLVAPWPIPFSASQDSAPL 57

Query: 586 DYDASRDLLGIDVDPQSRNAN 648
           DYD SR+LLGIDVDPQ R+ +
Sbjct: 58  DYDPSRELLGIDVDPQPRSVH 78


>ref|XP_009392939.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 398

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/79 (53%), Positives = 49/79 (62%)
 Frame = +1

Query: 406 IMSIPFASHGISTLLFPPGRWKKKNMSAGSFLTTLWPNSIAHLVLHWRAPKSINQDSAHP 585
           ++SI FAS  +S L  P GRWKKK  S G     L  N +  LV  W  P S +QDSA  
Sbjct: 1   MLSIRFASLRVSAL--PSGRWKKKR-SGGIVPAILEANRMVRLVAPWPIPFSASQDSAPL 57

Query: 586 DYDASRDLLGIDVDPQSRN 642
           DYD SR+LLGIDVDPQ R+
Sbjct: 58  DYDPSRELLGIDVDPQPRS 76


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