BLASTX nr result

ID: Cheilocostus21_contig00038281 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038281
         (860 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU48830.1| hypothetical protein TSUD_190600 [Trifolium subt...    49   1e-06

>dbj|GAU48830.1| hypothetical protein TSUD_190600 [Trifolium subterraneum]
          Length = 298

 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +1

Query: 322 STNGLPPPATWAKPPHGTLKINVDRPWIRKEDSAGVGYLIRDSNGMSF-GFFNPCFSCIC 498
           +T   P   TW KP  GT+ +NVD   ++  ++AG G LIRDSNG+   GF+        
Sbjct: 123 ATTAKPRLVTWTKPAEGTVCLNVDGSLLKATNTAGYGGLIRDSNGVFLSGFYGTATVQSI 182

Query: 499 LEAEALAI 522
           L AE +A+
Sbjct: 183 LFAELMAV 190



 Score = 32.7 bits (73), Expect(2) = 1e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 168 SYASLILIMFWHIWKARNDFVFNAQDFST 254
           ++  L  I+ W IW  RN+FVFN Q  ST
Sbjct: 69  NHGPLFFIVLWVIWCVRNEFVFNNQREST 97


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