BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00038108
         (765 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP75188.1| Retrovirus-related Pol polyprotein LINE-1, partia...    63   2e-07
gb|KYP46172.1| LINE-1 reverse transcriptase isogeny, partial [Ca...    62   3e-07
gb|KYP46897.1| Putative ribonuclease H protein At1g65750 family ...    62   4e-07
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   4e-07
gb|KYP46318.1| Transposon TX1 uncharacterized [Cajanus cajan]          58   6e-06

>gb|KYP75188.1| Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 855

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
 Frame = +1

Query: 358 LISLVTGMQIKYH*S-----NIGEDAIMQ*QKFITAS*ESLPIRYLGLYLGMRPSRRH-W 519
           L  LV G+++ +H S     NI  + + +   F+       P  YLGL++G +P+R   W
Sbjct: 425 LFELVVGLKVNFHKSKLLGANIDSEILGRMASFLNCKVGHFPCSYLGLFIGAKPNRLSTW 484

Query: 520 TNIVCKIQNKSTHWKAVLLSVGGRVTLVVC*MQVVTQLRISLSQRVINTLIELEDLL 690
             ++ K++ K T WK  LLS GGR+ L+   +  ++   +S  +     + +LE LL
Sbjct: 485 QTVISKVEKKLTKWKGKLLSFGGRLVLLKSVLNSISIYFLSFFKAPTGVISQLESLL 541


>gb|KYP46172.1| LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
          Length = 596

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
 Frame = +1

Query: 310 VIYAAKEDKISA*KTILIS--LVTGMQIKYH*S-----NIGEDAIMQ*QKFITAS*ESLP 468
           +I  A E  +   K IL S  L++GM++ YH S     N+ +  +     F+     SLP
Sbjct: 451 LIGEASESNLWTLKAILRSFELISGMKVNYHKSCLMGVNVEDVYLDTAANFLNCKVGSLP 510

Query: 469 IRYLGLYLGMRPSRRH-WTNIVCKIQNKSTHWKAVLLSVGGRVTLV 603
            RYLGLY+G  P RR  W  ++  ++NK   WK   +S+GGRVTL+
Sbjct: 511 FRYLGLYVGDNPRRRSAWGKLLEVLRNKLASWKHRYISIGGRVTLL 556


>gb|KYP46897.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 580

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
 Frame = +1

Query: 358 LISLVTGMQIKYH*S-----NIGEDAIMQ*QKFITAS*ESLPIRYLGLYLGMRPSRRH-W 519
           L  LV G+++ +H S     NI  + + Q   F+       P  YL L++G+ P+R   W
Sbjct: 103 LFELVAGLKVNFHKSKLLGANIDSEILGQMANFLNCKVGHFPCSYLDLFIGVNPNRLSTW 162

Query: 520 TNIVCKIQNKSTHWKAVLLSVGGRVTLVVC*MQVVTQLRISLSQRVINTLIELEDLL 690
             ++ K++ K T WK  LLS+GGR+ L+   +  +    +S  +     + +LE LL
Sbjct: 163 QTVISKVEKKLTKWKGKLLSLGGRLVLLKSVLNSIPIYFLSFFKAPTGVISQLESLL 219


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 58.5 bits (140), Expect(2) = 4e-07
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +1

Query: 355 ILISLVTGMQIKYH*S-----NIGEDAIMQ*QKFITAS*ESLPIRYLGLYLGMRPSR-RH 516
           I+  LV+G+Q+ +H S     N+    I +    +     ++P  YLGL +G  P+R R 
Sbjct: 702 IIFQLVSGLQVNFHKSSLMGLNVTSSWIQEAANSLMCKIGTIPFSYLGLPIGDNPARIRT 761

Query: 517 WTNIVCKIQNKSTHWKAVLLSVGGRVTLV 603
           W  I+ K++ K   WK  LLS+GGR+TL+
Sbjct: 762 WDPIIDKLEKKLASWKGKLLSLGGRLTLI 790



 Score = 24.3 bits (51), Expect(2) = 4e-07
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +3

Query: 639 FLIPKGD-KHIDRIRRSFIWC 698
           F +PKG  + I+++ R+F+WC
Sbjct: 805 FPVPKGVIEKINKLMRAFLWC 825


>gb|KYP46318.1| Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 863

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
 Frame = +1

Query: 310 VIYAAKEDKISA*KTIL--ISLVTGMQIKYH*S-----NIGEDAIMQ*QKFITAS*ESLP 468
           +I  A E  + + K +L    L++G++I +H S     N+  + +     F+     +LP
Sbjct: 474 LIGEATERNLWSIKAVLRCFELISGLKINFHKSCLMGMNVDNNFMHMASSFLNCKVGALP 533

Query: 469 IRYLGLYLGMRPSRRH-WTNIVCKIQNKSTHWKAVLLSVGGRVTLV 603
             YLGLY+G +P RR  W  ++  ++NK   WK   +S+GGRVTL+
Sbjct: 534 FCYLGLYVGDKPRRRAAWQRLIEVLRNKLVSWKHKYVSIGGRVTLI 579