BLASTX nr result
ID: Cheilocostus21_contig00037907
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00037907
(484 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1 [Musa acumina... 115 1e-26
ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform ... 106 2e-23
ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1 [Musa acumina... 91 4e-18
ref|XP_008782916.2| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 91 4e-18
ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1 alpha [Elaeis... 82 6e-15
ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1 alpha-like is... 81 1e-14
ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like [Phoenix... 79 4e-14
ref|XP_020531193.1| DNA topoisomerase 1 alpha isoform X2 [Ambore... 66 1e-09
gb|ERN18992.1| hypothetical protein AMTR_s00061p00026580, partia... 66 1e-09
ref|XP_020531189.1| DNA topoisomerase 1 alpha isoform X1 [Ambore... 66 1e-09
gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagu... 65 3e-09
ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus off... 65 3e-09
ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus off... 62 4e-08
ref|XP_020530235.1| DNA topoisomerase 1 alpha isoform X2 [Ambore... 59 5e-07
gb|ERN17669.1| hypothetical protein AMTR_s00059p00193620 [Ambore... 59 5e-07
ref|XP_011627735.1| DNA topoisomerase 1 alpha isoform X1 [Ambore... 59 5e-07
>ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
Length = 948
Score = 115 bits (287), Expect = 1e-26
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEK-K 236
KH + +K NDV+PK++D S+ +SDDSDD KPL+ R A ++K++++ SEK
Sbjct: 95 KHISYHKSTTNDVRPKYQDVSSLEVRESDDSDDGKPLSHRLNSPPAAVQKKNTMGSEKTH 154
Query: 235 LQSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQET 56
+ SS K VNKSTDK+N L K ++ E+SDD DD KPLS +F SS VN SH+M +T
Sbjct: 155 MHSSDHKFVNKSTDKMN-LDKPIIKREDSDDSDDEKPLSLKFSSSTVVNKGGPSHAM-KT 212
Query: 55 QSERPTVPPLTKM 17
QS +PT+ P K+
Sbjct: 213 QSAKPTLLPSLKI 225
>ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Musa acuminata
subsp. malaccensis]
ref|XP_009407902.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 951
Score = 106 bits (264), Expect = 2e-23
Identities = 57/131 (43%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = -1
Query: 406 TAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEK-KLQ 230
T+ +K NDV +H+D+S+P + DDS+D+KPL+ R S ++K++S + EK +
Sbjct: 99 TSYHKSTTNDVGLEHQDKSSPEVQELDDSNDDKPLSHRLNSVSVAVQKKNSTDLEKIDMH 158
Query: 229 SSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQETQS 50
S K V KSTDK++ L K +++E+SD DD+KPLS++F SS AVN + S M+ QS
Sbjct: 159 SLDHKFVKKSTDKMD-LDKPIIKNEDSDYSDDDKPLSYKFSSSAAVNKSGFSRVMKAPQS 217
Query: 49 ERPTVPPLTKM 17
+PT PP KM
Sbjct: 218 SKPTSPPSMKM 228
>ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
Length = 926
Score = 90.9 bits (224), Expect = 4e-18
Identities = 49/137 (35%), Positives = 77/137 (56%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKL 233
KH++ K + V+P+H+DES +SDDSDD+KPL+ R AS ++K+ ++SEK
Sbjct: 73 KHSSNCKSTTSHVKPQHQDESIAEVQNSDDSDDDKPLSHRLNSASVAVQKKFFMDSEKIH 132
Query: 232 QSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQETQ 53
+ S K+ + K+ + +E S+D DDNKPLS + S A ++ SH ++ Q
Sbjct: 133 KHSSDHYFAKNNTNKMIVDKSIIRNEESNDSDDNKPLSSKISSIAACSTGGPSHVVKLPQ 192
Query: 52 SERPTVPPLTKMKLKSK 2
S +PT P K+ K
Sbjct: 193 SAKPTSHPSMKVNSNIK 209
>ref|XP_008782916.2| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Phoenix
dactylifera]
Length = 950
Score = 90.9 bits (224), Expect = 4e-18
Identities = 55/137 (40%), Positives = 80/137 (58%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKL 233
KH A++KLA N + H D SDDSDD+KPL+ R AS + +S++++
Sbjct: 101 KHFAEHKLASNSKETAHLDNICADAESSDDSDDDKPLSHRLNAASMVFHRNNSMHAD--- 157
Query: 232 QSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQETQ 53
SS KL S DK++ L K +SE+SDD DD+KPLS +F SS V ++SSH+ + +
Sbjct: 158 -SSEHKLATSSKDKMD-LDKPCNKSEDSDDSDDDKPLSSKFSSSVVVEKSSSSHAKKVFE 215
Query: 52 SERPTVPPLTKMKLKSK 2
S R T K+K ++K
Sbjct: 216 SPRHTSLSSQKLKERTK 232
>ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1 alpha [Elaeis guineensis]
Length = 956
Score = 81.6 bits (200), Expect = 6e-15
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKL 233
KH + K N + H D SDDSDD+KPL+ R AS +K +S++ EK +
Sbjct: 103 KHLPEKKPTSNSRETMHLDNICADAESSDDSDDDKPLSHRLNAASMVFQKNNSMHPEKVV 162
Query: 232 -QSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQET 56
SS KL S DK++ L K + E+SDD DD+KPLS +F SS V +S HS +
Sbjct: 163 NHSSEHKLATSSKDKMD-LDKPCRKREDSDDSDDDKPLSSKF-SSSVVEKNSSLHSKKVL 220
Query: 55 QSERPTVPPLTKMKLKSK 2
+S R P K++ +K
Sbjct: 221 ESPRHASPSAQKVQESTK 238
Score = 63.9 bits (154), Expect = 9e-09
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = -1
Query: 409 HTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQ 230
H++++KLA + D+ DSDDSDD+KPL+ + +S+ +EK SS++S+K L+
Sbjct: 164 HSSEHKLATSSKDKMDLDKPCRKREDSDDSDDDKPLSSK--FSSSVVEKNSSLHSKKVLE 221
Query: 229 SSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRF--PSSGAVNSTAS 77
S + + S K+ K E+SDD +D+KPL FRF SSG ++ S
Sbjct: 222 SP--RHASPSAQKVQESTK-----EDSDDSEDDKPLLFRFQPKSSGGASTKIS 267
>ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1 alpha-like isoform X1 [Elaeis
guineensis]
ref|XP_019704056.1| PREDICTED: DNA topoisomerase 1 alpha-like isoform X1 [Elaeis
guineensis]
Length = 951
Score = 80.9 bits (198), Expect = 1e-14
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKL 233
KH A+ KL N+ + H D +SDDSDD+KPL+ R S ++K +S++ EK
Sbjct: 104 KHFAEQKLTSNNNETTHLDNFGADAENSDDSDDDKPLSHRLNAVSMAVQKNNSVHMEKVA 163
Query: 232 -QSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQET 56
SS KL K+N L K + E+SDD DD+K LS +F SS + S + +
Sbjct: 164 NHSSEHKLATSCKGKMN-LDKPCGKIEDSDDSDDDKTLSSKFSSSVVAEKNSFSQAKRAL 222
Query: 55 QSERPTVPPLTKMKLK 8
+S RPT L+ KLK
Sbjct: 223 ESPRPT--SLSSQKLK 236
>ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like [Phoenix dactylifera]
Length = 948
Score = 79.3 bits (194), Expect = 4e-14
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = -1
Query: 412 KHTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKL 233
KH A+ KL N+ + H + A +SDDSDD+KPL+ R S ++K +S++ EK +
Sbjct: 102 KHFAEQKLTSNNNKTTHYNFCANAE-NSDDSDDDKPLSHRLNAVSTVVQKNNSMHMEKVV 160
Query: 232 -QSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFPSSGAVNSTASSHSMQET 56
SS KL K+ L K ++E+SDD DD+KPLS +F SS +S H+ Q
Sbjct: 161 NHSSEHKLATSCKGKMT-LDKPCGKNEDSDDSDDDKPLSSKFSSSVVAGKNSSLHAKQAL 219
Query: 55 QSERPTVPPLTKMKLKSK 2
+S R T K K +K
Sbjct: 220 ESPRHTSLSSQKPKESTK 237
Score = 60.1 bits (144), Expect = 2e-07
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = -1
Query: 409 HTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQ 230
H++++KLA + D+ N DSDDSDD+KPL+ + + +S K SS+++++ L+
Sbjct: 162 HSSEHKLATSCKGKMTLDKPCGKNEDSDDSDDDKPLSSKFS-SSVVAGKNSSLHAKQALE 220
Query: 229 SSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRF-PSSGAVNSTASSHSMQE 59
S ++ K + E+SDD +D+KPL RF P S ST +SHS+++
Sbjct: 221 SPRHTSLSSQKPKES-------TKEDSDDSEDDKPLLSRFQPKSTGGASTKNSHSVEK 271
>ref|XP_020531193.1| DNA topoisomerase 1 alpha isoform X2 [Amborella trichopoda]
Length = 554
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP SA N++SDDSDD+KPLN R + T+ SS L SS L
Sbjct: 118 DSQPLQRP-SAEANVESDDSDDDKPLNSRVAAVAKTVRNNSS-GPNLPLPSSAMVL---- 171
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERPTV 35
K++ V + DD DD KPLS +FP SSGAV T+ + ++ E+P V
Sbjct: 172 --KMSVKSPVNVVKRSPDDSDDEKPLSQKFPQKSSSGAVAGTSIKPAYDDSDEEKPLV 227
>gb|ERN18992.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella
trichopoda]
Length = 595
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP SA N++SDDSDD+KPLN R + T+ SS L SS L
Sbjct: 118 DSQPLQRP-SAEANVESDDSDDDKPLNSRVAAVAKTVRNNSS-GPNLPLPSSAMVL---- 171
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERPTV 35
K++ V + DD DD KPLS +FP SSGAV T+ + ++ E+P V
Sbjct: 172 --KMSVKSPVNVVKRSPDDSDDEKPLSQKFPQKSSSGAVAGTSIKPAYDDSDEEKPLV 227
>ref|XP_020531189.1| DNA topoisomerase 1 alpha isoform X1 [Amborella trichopoda]
ref|XP_020531190.1| DNA topoisomerase 1 alpha isoform X1 [Amborella trichopoda]
ref|XP_020531191.1| DNA topoisomerase 1 alpha isoform X1 [Amborella trichopoda]
ref|XP_020531192.1| DNA topoisomerase 1 alpha isoform X1 [Amborella trichopoda]
Length = 651
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP SA N++SDDSDD+KPLN R + T+ SS L SS L
Sbjct: 118 DSQPLQRP-SAEANVESDDSDDDKPLNSRVAAVAKTVRNNSS-GPNLPLPSSAMVL---- 171
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERPTV 35
K++ V + DD DD KPLS +FP SSGAV T+ + ++ E+P V
Sbjct: 172 --KMSVKSPVNVVKRSPDDSDDEKPLSQKFPQKSSSGAVAGTSIKPAYDDSDEEKPLV 227
>gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagus officinalis]
Length = 926
Score = 65.5 bits (158), Expect = 3e-09
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -1
Query: 334 DSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSS-GSKLVNKSTDKLNYLGKTTVES 158
DSDDSDD+KPL+ R AS ++K SI+ +K Q S +K + DK+ L K+ S
Sbjct: 129 DSDDSDDDKPLSSRFNTASVALQKAYSIDHQKVAQGSLENKARGEGADKM-ILDKSCPRS 187
Query: 157 ENSDDCDDNKPLSFRFPS-SGAVNSTASSHSMQETQSERPTVPPLTKMKLKS 5
SDD DD +PLS RF S SGAV + +S PT P K+K S
Sbjct: 188 VVSDDSDDEQPLSARFSSPSGAV--------QKSNESPVPTSTPSQKIKATS 231
>ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
ref|XP_020265342.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
Length = 950
Score = 65.5 bits (158), Expect = 3e-09
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -1
Query: 334 DSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSS-GSKLVNKSTDKLNYLGKTTVES 158
DSDDSDD+KPL+ R AS ++K SI+ +K Q S +K + DK+ L K+ S
Sbjct: 129 DSDDSDDDKPLSSRFNTASVALQKAYSIDHQKVAQGSLENKARGEGADKM-ILDKSCPRS 187
Query: 157 ENSDDCDDNKPLSFRFPS-SGAVNSTASSHSMQETQSERPTVPPLTKMKLKS 5
SDD DD +PLS RF S SGAV + +S PT P K+K S
Sbjct: 188 VVSDDSDDEQPLSARFSSPSGAV--------QKSNESPVPTSTPSQKIKATS 231
>ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
ref|XP_020271602.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
Length = 936
Score = 62.0 bits (149), Expect = 4e-08
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Frame = -1
Query: 409 HTAQYKLAINDVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSIN---SEK 239
H+++ L V+ H + S +SDDSDD KPL+ R AS ++K +S+N +
Sbjct: 106 HSSKNGLPSVSVKTSHTNNSCDKVENSDDSDDGKPLSSRFNSASVAVQKTNSLNPATARV 165
Query: 238 KLQSSGSKLVNKSTDKLNYLGKTTVESENSDDCDDNKPLSFRFP-SSGAVNSTASSHSMQ 62
S K N++ D K+ V+ E SDD +D PLS +FP SSGAV + S
Sbjct: 166 VKHSLEHKAGNENVD-----NKSRVKREVSDDSEDGLPLSAKFPSSSGAVQRSNPSPMPT 220
Query: 61 ETQSER 44
T S++
Sbjct: 221 STTSQK 226
>ref|XP_020530235.1| DNA topoisomerase 1 alpha isoform X2 [Amborella trichopoda]
Length = 855
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP S P N+ S+DSDD+KPLN R + T++ +S L S S + K+
Sbjct: 113 DSQPLQRPSSEP-NMKSEDSDDDKPLNSRVAAVANTVKNKS---PGPNLPLSCSAMPVKT 168
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERP 41
K V + DD DD KPLS +FP S+GAV T+ + ++ E+P
Sbjct: 169 IVK----SPVNVVKRSPDDSDDEKPLSQKFPRKSSNGAVAGTSIKPTYDDSDEEKP 220
>gb|ERN17669.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
Length = 884
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP S P N+ S+DSDD+KPLN R + T++ +S L S S + K+
Sbjct: 113 DSQPLQRPSSEP-NMKSEDSDDDKPLNSRVAAVANTVKNKS---PGPNLPLSCSAMPVKT 168
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERP 41
K V + DD DD KPLS +FP S+GAV T+ + ++ E+P
Sbjct: 169 IVK----SPVNVVKRSPDDSDDEKPLSQKFPRKSSNGAVAGTSIKPTYDDSDEEKP 220
>ref|XP_011627735.1| DNA topoisomerase 1 alpha isoform X1 [Amborella trichopoda]
Length = 897
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = -1
Query: 379 DVQPKHEDESAPGNLDSDDSDDNKPLNQRTTLASATIEKRSSINSEKKLQSSGSKLVNKS 200
D QP S P N+ S+DSDD+KPLN R + T++ +S L S S + K+
Sbjct: 113 DSQPLQRPSSEP-NMKSEDSDDDKPLNSRVAAVANTVKNKS---PGPNLPLSCSAMPVKT 168
Query: 199 TDKLNYLGKTTVESENSDDCDDNKPLSFRFP---SSGAVNSTASSHSMQETQSERP 41
K V + DD DD KPLS +FP S+GAV T+ + ++ E+P
Sbjct: 169 IVK----SPVNVVKRSPDDSDDEKPLSQKFPRKSSNGAVAGTSIKPTYDDSDEEKP 220