BLASTX nr result

ID: Cheilocostus21_contig00037777 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00037777
         (733 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009407992.1| PREDICTED: transcription factor UPBEAT1-like...    62   1e-08
ref|XP_011468816.1| PREDICTED: transcription factor UPBEAT1 [Fra...    55   5e-06
ref|XP_006841627.1| transcription factor UPBEAT1 [Amborella tric...    55   7e-06

>ref|XP_009407992.1| PREDICTED: transcription factor UPBEAT1-like [Musa acuminata subsp.
           malaccensis]
          Length = 101

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
 Frame = +3

Query: 282 RSTRASGATVRWA-----RPSXXXXXXXXXXXXXXXIKALQALVPNGGSISGLDRLFREA 446
           R+ R  GATVRW                        ++ LQ LVPNG S+  LD LFREA
Sbjct: 14  RTKRVGGATVRWTGKPLISKKRTARSRKAMSCIERKLEVLQELVPNGPSVQELDGLFREA 73

Query: 447 ADYIVCLQAQVRLMQMMLGESPSSAQD 527
           A+YIV LQ QV++MQ++L E      D
Sbjct: 74  ANYIVSLQVQVKVMQILLDELSPKVSD 100


>ref|XP_011468816.1| PREDICTED: transcription factor UPBEAT1 [Fragaria vesca subsp.
           vesca]
          Length = 147

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
 Frame = +3

Query: 375 IKALQALVPNGGS--ISGLDRLFREAADYIVCLQAQVRLMQMML 500
           ++ L+ L+PN  S  + GLD LFRE ADYI+CLQ++VRLMQMM+
Sbjct: 95  VRTLKRLIPNSDSKSVEGLDGLFRETADYILCLQSRVRLMQMMV 138


>ref|XP_006841627.1| transcription factor UPBEAT1 [Amborella trichopoda]
 gb|ERN03302.1| hypothetical protein AMTR_s00003p00228840 [Amborella trichopoda]
          Length = 134

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 375 IKALQALVPNGGSISGLDRLFREAADYIVCLQAQVRLMQMML 500
           ++AL+ LVPNG S  GLD LFRE ADYI CLQ QV++MQ+M+
Sbjct: 76  VEALKKLVPNGES-EGLDGLFRETADYITCLQMQVKVMQIMV 116


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