BLASTX nr result

ID: Cheilocostus21_contig00037642 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00037642
         (526 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009421236.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    46   1e-07
ref|XP_009421237.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    46   1e-07
ref|XP_009404462.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    46   1e-07

>ref|XP_009421236.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 489

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = -3

Query: 359 AQATDEVRNSEHYKIESLSISDGKDGGDQEPGDADDADSKS 237
           +QA DE + SE  KIESLSISDGKD G++   D DD++ K+
Sbjct: 33  SQAADEAQPSELKKIESLSISDGKDSGERLLDDPDDSEIKA 73



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -1

Query: 454 LAETAAPPVNAAE*RSWAGVRSDDKKETDAP 362
           +AE AAPP    E RSWA   SD++KE  AP
Sbjct: 1   MAENAAPPAKTEEKRSWADEESDEEKEAAAP 31


>ref|XP_009421237.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 445

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = -3

Query: 359 AQATDEVRNSEHYKIESLSISDGKDGGDQEPGDADDADSKS 237
           +QA DE + SE  KIESLSISDGKD G++   D DD++ K+
Sbjct: 33  SQAADEAQPSELKKIESLSISDGKDSGERLLDDPDDSEIKA 73



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -1

Query: 454 LAETAAPPVNAAE*RSWAGVRSDDKKETDAP 362
           +AE AAPP    E RSWA   SD++KE  AP
Sbjct: 1   MAENAAPPAKTEEKRSWADEESDEEKEAAAP 31


>ref|XP_009404462.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Musa
           acuminata subsp. malaccensis]
          Length = 499

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -3

Query: 359 AQATDEVRNSEHYKIESLSISDGKDGGDQEPGDAD 255
           +QA DE + SE  KIESLSISD KDGGD+ P D+D
Sbjct: 33  SQAADEAQPSELKKIESLSISDVKDGGDRAPEDSD 67



 Score = 37.0 bits (84), Expect(2) = 1e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -1

Query: 454 LAETAAPPVNAAE*RSWAGVRSDDKKETDAP 362
           +A++AAPP  A E RSWA   SD+++E  AP
Sbjct: 1   MADSAAPPAKAEEKRSWADEESDEEQEAAAP 31


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