BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00037560
         (956 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   206   1e-56
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   202   9e-56
gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposo...   197   2e-55
ref|XP_021985475.1| uncharacterized protein LOC110881565 [Helian...   172   4e-47
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         173   1e-44
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         172   2e-44
emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]         172   2e-44
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]     172   3e-44
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   172   3e-44
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         172   3e-44
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   172   3e-44
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   172   3e-44
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   172   3e-44
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   172   3e-44
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] >g...   172   3e-44
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   172   3e-44
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   172   3e-44
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   172   3e-44
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         172   3e-44
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     172   3e-44

>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  206 bits (525), Expect = 1e-56
 Identities = 111/325 (34%), Positives = 185/325 (56%), Gaps = 7/325 (2%)
 Frame = -1

Query: 956 YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
           + M D  P +DQ+H F+N+I+++        +   +S L+ KLPPSWS+F + ++     
Sbjct: 4   FQMEDGKPFSDQVHEFENIIYDMKMKEITLPDIMLVSLLISKLPPSWSEFARSLKHKPDH 63

Query: 776 QSLSSVIQSIRIEDQYRT--RELNKDTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
            +LS ++ ++RIED+YR   ++ NK    +K ++ + A   +                  
Sbjct: 64  FTLSDLLVTLRIEDKYRISQKDSNKTPFQAKAHLVKNANKPKQKFFKKIGFSNNNKFGQS 123

Query: 602 XXXXXXXXXXXXXXXKGNKKLKDGQ-FCFVCGKDNHLASKCYFRKTEK--VQSKKKGSRP 432
                          K   K++  + FCFVCG++NH A  C+ R+ +   + S  K S  
Sbjct: 124 SHFSKNKNKAFNNNYKPKSKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSS- 182

Query: 431 RPQVNIIEGEPSTSTI--RSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSS 258
           +PQ N+I    S+ +   R    +P +N  Y+ ++WW+DSGANVH+C +K+ F+S+Q+  
Sbjct: 183 QPQANVITANASSDSPSNRYHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECG 242

Query: 257 GGSVIMGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVL 78
             +V MGNG+  +V+G G V L+ +SG  L+L  V  V ++RKNLIS +LLVQ G+K+V 
Sbjct: 243 TRTVSMGNGSLARVIGLGRVELELSSGNCLVLDEVFHVSEIRKNLISAALLVQQGFKVVF 302

Query: 77  EANKVVITKKDNFICKGFISEGLFR 3
           E+N+VVI++  +F+ KG+I +GLF+
Sbjct: 303 ESNRVVISRHGSFVGKGYICDGLFK 327


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  202 bits (513), Expect = 9e-56
 Identities = 110/323 (34%), Positives = 186/323 (57%), Gaps = 7/323 (2%)
 Frame = -1

Query: 950 MVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQITQS 771
           M D    +DQ+H F+N+I+++        +   +S L+ KLPPSWS+F + ++      +
Sbjct: 4   MEDGKHFSDQVHEFENIIYDMKMKEITLPDIMLVSLLISKLPPSWSEFARSLKHKPDNFT 63

Query: 770 LSSVIQSIRIEDQYR-TRELNKDTP-NSKVNITEVAKSNQXXXXXXXXXXXXXXXXXXXX 597
           LS ++ ++RIED++R +++++  TP  +K ++ E A   +                    
Sbjct: 64  LSDLLVTLRIEDKHRISQKVSNKTPFQAKAHLVENANKPKQKIFKKSGFSNNNKFGQSSH 123

Query: 596 XXXXXXXXXXXXXKGNKKLKDGQ-FCFVCGKDNHLASKCYFRKTEK--VQSKKKGSRPRP 426
                        K   K++  + FCFVCG++NH A  C+ R+ +   + S  K S  +P
Sbjct: 124 FSKNKNKAFNNNYKPKSKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSS-QP 182

Query: 425 QVNIIEGEPSTSTI--RSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGG 252
           Q N+I    S+ +   R    +P +N  Y+ ++WW+DSGANVH+C +K+ F+S+Q+    
Sbjct: 183 QANVITANASSDSPSNRYHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTR 242

Query: 251 SVIMGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEA 72
           +V MGNG+  +V+G G V L+ +SG  L+L  V  V ++RKNLIS +LLVQ G+K+V E+
Sbjct: 243 TVSMGNGSLARVIGLGRVELELSSGNCLVLDEVFHVSEIRKNLISAALLVQQGFKVVFES 302

Query: 71  NKVVITKKDNFICKGFISEGLFR 3
           N+VVI++  +F+ KG+I +GLF+
Sbjct: 303 NRVVISRHGSFVGKGYICDGLFK 325


>gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 489

 Score =  197 bits (500), Expect = 2e-55
 Identities = 108/324 (33%), Positives = 178/324 (54%), Gaps = 6/324 (1%)
 Frame = -1

Query: 956 YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
           + M D  P +DQ+H F+N+I+++      F +   IS L+ KL PSWS+  + ++     
Sbjct: 4   FQMEDGKPFSDQVHEFENIIYDMKMKEITFPDIMLISLLISKLSPSWSEIARSLKHKPDH 63

Query: 776 QSLSSVIQSIRIEDQYRT--RELNKDTPNSKVNITEVA-KSNQXXXXXXXXXXXXXXXXX 606
            +LS+++ ++RIED++R   ++ NK    +K ++ E A KS Q                 
Sbjct: 64  FTLSNLLVTLRIEDKHRISQKDSNKTPFQAKGHLVENANKSKQKIFKKYDFSNNNKFGQS 123

Query: 605 XXXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEK---VQSKKKGSR 435
                             +K   +  FCFVCG++NH A  C+ R+ +        K  S+
Sbjct: 124 SYFSKNKKKAFNNNYKPKSKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQ 183

Query: 434 PRPQVNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSG 255
           P+  V        + + R    +P +N  Y+ ++WW+DSGANVH+C +K+ F+S+Q+   
Sbjct: 184 PQDNVITANASSDSPSNRYHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECGT 243

Query: 254 GSVIMGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLE 75
            +V MGNG+  +V+G G V L+ +S   L+L  V  V ++RKNLIS +LLVQ G+K+V E
Sbjct: 244 RTVSMGNGSLARVIGLGRVELELSSRNCLVLDEVFHVSEIRKNLISVALLVQQGFKVVFE 303

Query: 74  ANKVVITKKDNFICKGFISEGLFR 3
           +N+VVI++   F+ KG+I +GLF+
Sbjct: 304 SNRVVISQHGFFVGKGYICDGLFK 327


>ref|XP_021985475.1| uncharacterized protein LOC110881565 [Helianthus annuus]
          Length = 389

 Score =  172 bits (436), Expect = 4e-47
 Identities = 97/320 (30%), Positives = 170/320 (53%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956 YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
           + M+D   +  Q+   Q ++H+IH  G + SE++Q+  +++KLPPSW  F   ++  +  
Sbjct: 70  FKMIDAKTVMSQVQELQVILHDIHAEGMVLSETFQVVAMIEKLPPSWVDFKNYLKHKRKE 129

Query: 776 QSLSSVIQSIRIEDQYRTRELNKDTPNS-KVNITEVAKSNQXXXXXXXXXXXXXXXXXXX 600
            ++  ++  +RIE+  +      D P + K N+ E  +S++                   
Sbjct: 130 MTIEDLVVRLRIEEDNKLALKQIDGPETVKANLVEHGQSSKGKNSGKGGKKGHGKRFNLG 189

Query: 599 XXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQV 420
                          G KK +    C+ C K  H AS+C      K+  KK+ ++    V
Sbjct: 190 PKGGV----------GKKKFQGT--CYNCQKQGHKASEC------KLPKKKENAQQVNMV 231

Query: 419 NIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQD-SSGGSVI 243
           ++++   +  T  SI  T    +  ++ +WW+D+GA+ H+C +K  F +F++ ++G  V 
Sbjct: 232 DVVDKLVAMVTDLSILVTEVNIVGQNNKDWWVDTGASQHLCFDKSLFNTFKEVTNGEKVF 291

Query: 242 MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
           MGN  + ++ G GNV LK TSGK L L NVL VP++RKNL+SG  L + G+K+V+E++KV
Sbjct: 292 MGNSATAEIKGEGNVVLKMTSGKELTLSNVLYVPEIRKNLVSGWQLNKFGFKMVIESDKV 351

Query: 62  VITKKDNFICKGFISEGLFR 3
           V+TK   ++ KG+   G+F+
Sbjct: 352 VLTKNGVYVGKGYALNGMFK 371


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  173 bits (438), Expect = 1e-44
 Identities = 103/320 (32%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         PS+      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPSVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  172 bits (437), Expect = 2e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTREL--NKDTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGLGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
          Length = 1356

 Score =  172 bits (437), Expect = 2e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTREL--NKDTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGLGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1433

 Score =  172 bits (436), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKALAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFISKGYECGGLFR 409


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956 YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
           Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 73  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 132

Query: 776 QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
            S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 133 YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 192

Query: 602 XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                            N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 193 ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 232

Query: 422 VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
            N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 233 ANVTIG--NTGDGSGYGNLPAVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 290

Query: 242 MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
           MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 291 MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 350

Query: 62  VITKKDNFICKGFISEGLFR 3
           V++K   FI KG+   GLFR
Sbjct: 351 VVSKHGYFIGKGYECGGLFR 370


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
 emb|CAD41412.2| OSJNBb0078D11.12 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU10767.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU90098.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 112  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 171

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 172  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 232  ----------------NNNPNQDERTCFVCGQIGHLARKCPQRKGMKAPAGQTSK----S 271

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 272  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 329

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 330  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 389

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 390  VVSKHGYFIGKGYECGGLFR 409


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  172 bits (435), Expect = 3e-44
 Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
 Frame = -1

Query: 956  YMMVDHIPINDQIHVFQNMIHEIHRGGTIFSESYQISCLLDKLPPSWSKFGQDIRRSQIT 777
            Y M D+  + +Q H  Q M  E+     +  + +   C++ KLPPSW  FG  ++  +  
Sbjct: 201  YKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQE 260

Query: 776  QSLSSVIQSIRIEDQYRTRELNK--DTPNSKVNITEVAKSNQXXXXXXXXXXXXXXXXXX 603
             S+  +I S+ +E++ R ++     D   S  N+   A++                    
Sbjct: 261  YSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 320

Query: 602  XXXXXXXXXXXXXXXKGNKKLKDGQFCFVCGKDNHLASKCYFRKTEKVQSKKKGSRPRPQ 423
                             N   +D + CFVCG+  HLA KC  RK  K  + +        
Sbjct: 321  ----------------NNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSK----S 360

Query: 422  VNIIEGEPSTSTIRSISFTPSINLAYHDSEWWLDSGANVHICTNKEYFTSFQDSSGGSVI 243
             N+  G  +T         P++      + WW+D+GANVH+C +   F+S+Q + G +V+
Sbjct: 361  ANVTIG--NTGDGSGYGNLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVL 418

Query: 242  MGNGTSVKVLGHGNVNLKFTSGKTLLLHNVLLVPDVRKNLISGSLLVQLGYKIVLEANKV 63
            MGNG+   V G G V+LKFTSGK + L NV  VP + +NL+SGS L + G+K+V E+NKV
Sbjct: 419  MGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKV 478

Query: 62   VITKKDNFICKGFISEGLFR 3
            V++K   FI KG+   GLFR
Sbjct: 479  VVSKHGYFIGKGYECGGLFR 498