BLASTX nr result

ID: Cheilocostus21_contig00037064 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00037064
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413851.1| PREDICTED: F-box/LRR-repeat protein 3-like [...    56   4e-06

>ref|XP_009413851.1| PREDICTED: F-box/LRR-repeat protein 3-like [Musa acuminata subsp.
           malaccensis]
          Length = 363

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
 Frame = -3

Query: 516 PGNYGLDAAVHRNPAPQIPHPRGSPWPSDRRVLRSTTCAQIAIERWEIQEIALRRRIGAG 337
           P    L+   HR+       P+G   P    V  +  CA I+I   +++ I+LRRR G G
Sbjct: 83  PDLESLNLNAHRSLIELDEEPQGVEPPD---VTDAGLCA-ISICCRKLKNISLRRRKGVG 138

Query: 336 GTVCCRI----------DLTWPRAARSRLRN----LTSLSFL*LRGCFLVIPAGLARVAN 199
                 +          DL+W      R       L SL  L LRGC LV  +GLA +AN
Sbjct: 139 DVGAIELAKHAKGLSSLDLSWCSKVTDRAVGAFCALNSLMVLCLRGCPLVTDSGLACLAN 198

Query: 198 LPAAKTLGVLDRSECGQTTETGI 130
            P +++L VLD SEC Q T+ G+
Sbjct: 199 GPLSRSLRVLDVSECDQITDLGV 221


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