BLASTX nr result

ID: Cheilocostus21_contig00036692 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036692
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018685812.1| PREDICTED: CRM-domain containing factor CFM3...    71   3e-11
ref|XP_018685811.1| PREDICTED: CRM-domain containing factor CFM3...    71   3e-11
ref|XP_009412926.1| PREDICTED: CRM-domain containing factor CFM3...    71   3e-11

>ref|XP_018685812.1| PREDICTED: CRM-domain containing factor CFM3A,
           chloroplastic/mitochondrial isoform X3 [Musa acuminata
           subsp. malaccensis]
          Length = 813

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   IHPGYGSETLQNNSCFAEEDKRLDKISLLDEKKSGSELDGPNSGFTDEEIPGKNRLVDEN 180
           IH G+ +ETL  N  F  ED+R  K + +D K+ G                      D+N
Sbjct: 227 IHSGFVNETLMKNFEFGGEDER-HKWTSVDAKRRGCS--------------------DQN 265

Query: 181 ESSSYFDDPSNVSLKGRCPVVSAGAISQISSTVDASSMSNTEFDSLNVDSDLNVANQLPI 360
           ++S  F D S VS++G   V+S    SQ SS V  +S  +   D L  D+D  VA QLPI
Sbjct: 266 KTSLNFGDNSGVSVEGGFHVLSTDKTSQTSS-VGGASFRDHGIDPLEADTDPKVAFQLPI 324

Query: 361 RDSELRGNRRKSSFSETV-RLKYSMDSTSSKDRLSVPFDNSDSE 489
           RD +L  N  KS  S  V +LK SM S++ K  +   F  S S+
Sbjct: 325 RDYDLNENGGKSRVSVIVDKLKDSMGSSAPKINVCASFGKSASK 368


>ref|XP_018685811.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 959

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   IHPGYGSETLQNNSCFAEEDKRLDKISLLDEKKSGSELDGPNSGFTDEEIPGKNRLVDEN 180
           IH G+ +ETL  N  F  ED+R  K + +D K+ G                      D+N
Sbjct: 227 IHSGFVNETLMKNFEFGGEDER-HKWTSVDAKRRGCS--------------------DQN 265

Query: 181 ESSSYFDDPSNVSLKGRCPVVSAGAISQISSTVDASSMSNTEFDSLNVDSDLNVANQLPI 360
           ++S  F D S VS++G   V+S    SQ SS V  +S  +   D L  D+D  VA QLPI
Sbjct: 266 KTSLNFGDNSGVSVEGGFHVLSTDKTSQTSS-VGGASFRDHGIDPLEADTDPKVAFQLPI 324

Query: 361 RDSELRGNRRKSSFSETV-RLKYSMDSTSSKDRLSVPFDNSDSE 489
           RD +L  N  KS  S  V +LK SM S++ K  +   F  S S+
Sbjct: 325 RDYDLNENGGKSRVSVIVDKLKDSMGSSAPKINVCASFGKSASK 368


>ref|XP_009412926.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 1014

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   IHPGYGSETLQNNSCFAEEDKRLDKISLLDEKKSGSELDGPNSGFTDEEIPGKNRLVDEN 180
           IH G+ +ETL  N  F  ED+R  K + +D K+ G                      D+N
Sbjct: 227 IHSGFVNETLMKNFEFGGEDER-HKWTSVDAKRRGCS--------------------DQN 265

Query: 181 ESSSYFDDPSNVSLKGRCPVVSAGAISQISSTVDASSMSNTEFDSLNVDSDLNVANQLPI 360
           ++S  F D S VS++G   V+S    SQ SS V  +S  +   D L  D+D  VA QLPI
Sbjct: 266 KTSLNFGDNSGVSVEGGFHVLSTDKTSQTSS-VGGASFRDHGIDPLEADTDPKVAFQLPI 324

Query: 361 RDSELRGNRRKSSFSETV-RLKYSMDSTSSKDRLSVPFDNSDSE 489
           RD +L  N  KS  S  V +LK SM S++ K  +   F  S S+
Sbjct: 325 RDYDLNENGGKSRVSVIVDKLKDSMGSSAPKINVCASFGKSASK 368


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