BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036447
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO58525.1| Ribosomal protein S1 [Corchorus olitorius]              50   5e-09

>gb|OMO58525.1| Ribosomal protein S1 [Corchorus olitorius]
          Length = 387

 Score = 50.4 bits (119), Expect(2) = 5e-09
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +2

Query: 2   INGLLHVLQIIHDRVSDISNVLQPGDILK 88
           INGLLHV QI HDRVSDI+ VLQPGD LK
Sbjct: 282 INGLLHVSQISHDRVSDIATVLQPGDTLK 310



 Score = 37.7 bits (86), Expect(2) = 5e-09
 Identities = 24/51 (47%), Positives = 31/51 (60%)
 Frame = +1

Query: 169 RYYITYASSIQRRNLMAFQFIM*ISFWSGLTLNSDGSLGCITSALRAEGLD 321
           R  I  A ++ R +++ FQ        SGLTL+SDG LG +TS L AEGLD
Sbjct: 331 RQRIAQAEAMARADMLRFQPE------SGLTLSSDGILGPLTSDLPAEGLD 375