BLASTX nr result

ID: Cheilocostus21_contig00036432 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036432
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009399547.1| PREDICTED: nuclear pore complex protein NUP9...    75   9e-13
gb|KHN46906.1| Nuclear pore complex protein Nup98-Nup96 [Glycine...    58   7e-07
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein NUP9...    58   7e-07
ref|XP_004978405.1| nuclear pore complex protein NUP98A isoform ...    57   1e-06
ref|XP_004978404.1| nuclear pore complex protein NUP98A isoform ...    57   1e-06
ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phas...    57   1e-06
ref|XP_012703175.1| nuclear pore complex protein NUP98A isoform ...    57   2e-06
ref|XP_004977666.1| nuclear pore complex protein NUP98A isoform ...    57   2e-06
ref|XP_004958823.1| nuclear pore complex protein NUP98A isoform ...    56   3e-06
ref|XP_004958821.1| nuclear pore complex protein NUP98A isoform ...    56   3e-06
emb|CDY53221.1| BnaA02g19470D [Brassica napus]                         56   3e-06

>ref|XP_009399547.1| PREDICTED: nuclear pore complex protein NUP96 [Musa acuminata
           subsp. malaccensis]
          Length = 1066

 Score = 74.7 bits (182), Expect = 9e-13
 Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
 Frame = -3

Query: 198 NSHLIHNRQSET---DCHSMILTQSNGRGIPYT-DEESLLPSLNSSDYYTKPSIDELEAR 31
           +SH + N QSE    DC S+ L Q   R I  + D ESLLPSL+SSDY+TKPSIDEL A 
Sbjct: 23  DSHFVCNCQSEAILDDCTSVNLAQCKRRRISCSRDVESLLPSLSSSDYFTKPSIDELAAH 82

Query: 30  EIIDPGYCSR 1
           EI+D GYCSR
Sbjct: 83  EIVDSGYCSR 92


>gb|KHN46906.1| Nuclear pore complex protein Nup98-Nup96 [Glycine soja]
          Length = 1022

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -3

Query: 111 TDEESLLPSLNSSDYYTKPSIDELEAREIIDPGYCSR 1
           T+ E+ LP LNSS YYTKPS+ EL ARE+++PGYCSR
Sbjct: 35  TETEASLPILNSSGYYTKPSLKELVARELVEPGYCSR 71


>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein NUP96 [Glycine max]
 ref|XP_006595657.1| PREDICTED: nuclear pore complex protein NUP96 [Glycine max]
 gb|KRH14080.1| hypothetical protein GLYMA_14G005800 [Glycine max]
 gb|KRH14081.1| hypothetical protein GLYMA_14G005800 [Glycine max]
 gb|KRH14082.1| hypothetical protein GLYMA_14G005800 [Glycine max]
 gb|KRH14083.1| hypothetical protein GLYMA_14G005800 [Glycine max]
 gb|KRH14084.1| hypothetical protein GLYMA_14G005800 [Glycine max]
 gb|KRH14085.1| hypothetical protein GLYMA_14G005800 [Glycine max]
          Length = 1022

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -3

Query: 111 TDEESLLPSLNSSDYYTKPSIDELEAREIIDPGYCSR 1
           T+ E+ LP LNSS YYTKPS+ EL ARE+++PGYCSR
Sbjct: 35  TETEASLPILNSSGYYTKPSLKELVARELVEPGYCSR 71


>ref|XP_004978405.1| nuclear pore complex protein NUP98A isoform X2 [Setaria italica]
          Length = 915

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +   +S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 719 DTSTESGRDKTVKSPSSSPLVENGQQHEPSH-----HGNGKG---TSVERLLPKLPQEDY 770

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 771 FTEPSLEELAAKERGEPGYCSR 792


>ref|XP_004978404.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 gb|KQK93224.1| hypothetical protein SETIT_025940mg [Setaria italica]
          Length = 919

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +   +S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 723 DTSTESGRDKTVKSPSSSPLVENGQQHEPSH-----HGNGKG---TSVERLLPKLPQEDY 774

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 775 FTEPSLEELAAKERGEPGYCSR 796


>ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
 ref|XP_007142514.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
 gb|ESW14507.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
 gb|ESW14508.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
          Length = 1022

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -3

Query: 111 TDEESLLPSLNSSDYYTKPSIDELEAREIIDPGYCSR 1
           T+ E+ LP LNSS YYTKPS+ EL ARE+++PGYC R
Sbjct: 35  TETEAFLPILNSSGYYTKPSLKELVARELVEPGYCGR 71


>ref|XP_012703175.1| nuclear pore complex protein NUP98A isoform X2 [Setaria italica]
          Length = 916

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +   +S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 720 DTSTESGRDKTVKSPRSSPLVENGQQHEPSH-----HGNGKG---TSVERLLPKLPQEDY 771

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 772 FTEPSLEELAAKERGEPGYCSR 793


>ref|XP_004977666.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_004977668.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_004977669.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_004977670.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_012703174.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_022684368.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 gb|KQL00046.1| hypothetical protein SETIT_009305mg [Setaria italica]
          Length = 920

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +   +S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 724 DTSTESGRDKTVKSPRSSPLVENGQQHEPSH-----HGNGKG---TSVERLLPKLPQEDY 775

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 776 FTEPSLEELAAKERGEPGYCSR 797


>ref|XP_004958823.1| nuclear pore complex protein NUP98A isoform X2 [Setaria italica]
          Length = 915

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +    S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 719 DTSTESGRDKTVKSPSGSPLVENGQQHEPRH-----HGNGKG---TSVERLLPKLPQEDY 770

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 771 FTEPSLEELAAKERGEPGYCSR 792


>ref|XP_004958821.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_004958822.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 ref|XP_022680454.1| nuclear pore complex protein NUP98A isoform X1 [Setaria italica]
 gb|KQL27329.1| hypothetical protein SETIT_028858mg [Setaria italica]
          Length = 919

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%)
 Frame = -3

Query: 246 DYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPYTDEESLLPSLNSSDY 67
           D S +   D+  +    S L+ N Q     H       NG+G   T  E LLP L   DY
Sbjct: 723 DTSTESGRDKTVKSPSGSPLVENGQQHEPRH-----HGNGKG---TSVERLLPKLPQEDY 774

Query: 66  YTKPSIDELEAREIIDPGYCSR 1
           +T+PS++EL A+E  +PGYCSR
Sbjct: 775 FTEPSLEELAAKERGEPGYCSR 796


>emb|CDY53221.1| BnaA02g19470D [Brassica napus]
          Length = 1063

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/97 (40%), Positives = 51/97 (52%)
 Frame = -3

Query: 291 YISDVNSLVPALHSSDYSIKQSIDRLTERKINSHLIHNRQSETDCHSMILTQSNGRGIPY 112
           Y S V+SL  +L    +SI  S+  L   +I++       +  D H  IL   N      
Sbjct: 16  YGSAVDSLSLSLSLPWWSITASLSILQAPEIST-----MATSLDSHRKILFDGN------ 64

Query: 111 TDEESLLPSLNSSDYYTKPSIDELEAREIIDPGYCSR 1
            D +  LPSLNS DY+ KPS++EL  REI  PGYCSR
Sbjct: 65  -DIKDSLPSLNSPDYFLKPSMNELVQREIESPGYCSR 100


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