BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036220
         (1063 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   461   e-145
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   461   e-144
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   431   e-140
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo...   391   e-130
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   419   e-130
gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]       399   e-129
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa]                        402   e-129
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   405   e-128
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   411   e-128
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo...   389   e-128
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     404   e-127
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            407   e-126
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   407   e-125
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        394   e-124
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     395   e-124
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            390   e-124
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   396   e-124
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   392   e-123
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     394   e-123
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         386   e-123

>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  461 bits (1186), Expect = e-145
 Identities = 220/356 (61%), Positives = 274/356 (76%), Gaps = 4/356 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SERGL++LSKRGLLSGQ T KL+ CEHC+ GKQ RV FSTG+HK+KG +DY HS
Sbjct: 945  MRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHS 1004

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGP+   SKGG RY+LTFIDDYSRKVWVYFLK+K +V +NFKQ+KAL+E QTGKKI+ 
Sbjct: 1005 DLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTGKKIKR 1064

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
             RTDNGLEFC G+FN+FCK+EGIVRH TVR TPQQNGVAERMNRTLLER RC+ SN+GL 
Sbjct: 1065 FRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNAGLG 1124

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            ++FWAEA +TACYLVNRSP+T+I+ KTPEE+WS  PADYS LRVFGCP Y H+N+GKL+P
Sbjct: 1125 EEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVNEGKLKP 1184

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+KK IF+GY  GVKG+++W PDP + K +ISRDV FDE SML+S        ++     
Sbjct: 1185 RAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGD 1244

Query: 163  H---KKVEFEIE-NVKSSDKGSQSSPTQLPISEEIEETPVREKYTFGRDRIPRPTK 8
            H   K+VE +++  + +     Q    ++  S+E +E+P  + Y+    R  R  K
Sbjct: 1245 HGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDE-DESPQEKPYSIATGRTKRQIK 1299


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  461 bits (1186), Expect = e-144
 Identities = 220/356 (61%), Positives = 274/356 (76%), Gaps = 4/356 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SERGL++LSKRGLLSGQ T KL+ CEHC+ GKQ RV FSTG+HK+KG +DY HS
Sbjct: 924  MRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHS 983

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGP+   SKGG RY+LTFIDDYSRKVWVYFLK+K +V +NFKQ+KAL+E QTGKKI+ 
Sbjct: 984  DLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTGKKIKR 1043

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
             RTDNGLEFC G+FN+FCK+EGIVRH TVR TPQQNGVAERMNRTLLER RC+ SN+GL 
Sbjct: 1044 FRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNAGLG 1103

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            ++FWAEA +TACYLVNRSP+T+I+ KTPEE+WS  PADYS LRVFGCP Y H+N+GKL+P
Sbjct: 1104 EEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVNEGKLKP 1163

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+KK IF+GY  GVKG+++W PDP + K +ISRDV FDE SML+S        ++     
Sbjct: 1164 RAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGD 1223

Query: 163  H---KKVEFEIE-NVKSSDKGSQSSPTQLPISEEIEETPVREKYTFGRDRIPRPTK 8
            H   K+VE +++  + +     Q    ++  S+E +E+P  + Y+    R  R  K
Sbjct: 1224 HGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDE-DESPQEKPYSIATGRTKRQIK 1278


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  431 bits (1109), Expect = e-140
 Identities = 201/360 (55%), Positives = 269/360 (74%), Gaps = 6/360 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE+G+ +LSK+GLL  Q   KL+ CEHC+ GKQKRVSFST  H++KG LDYIHS
Sbjct: 127  MRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHS 186

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGP+ +PS GG RYM+T IDD+SRKVWVYFL++KN+ F  FK+WK LVE QTGKK++ 
Sbjct: 187  DLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKK 246

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGL- 527
            LRTDNGLEFC GDFN+FC + GI RH T+ G PQQNGVAER+NRT+LER RC+LSN+GL 
Sbjct: 247  LRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLW 306

Query: 526  -SKDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKL 350
              ++ W EAASTACYL+NRSP++S++ K PEEIWS +P DYS LR+FGCP Y H+NDGKL
Sbjct: 307  HQRELWVEAASTACYLINRSPHSSLNFKIPEEIWSGNPIDYSNLRIFGCPAYAHVNDGKL 366

Query: 349  EPRSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYT- 173
             PR+ K IF+GY +  KG+++W  +  + + ++SRDV F+E ++L S  + +V+S +   
Sbjct: 367  APRAIKCIFLGYASESKGYRLWCSESKSRRLILSRDVTFNEDALLSSGKQSSVSSSSTNN 426

Query: 172  -ESSHKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPV--REKYTFGRDRIPRPTKKP 2
             + + +KVE E+++V  +     SS T+  I +  ++ P+  +E+Y   RDR  R  K P
Sbjct: 427  LQGTSEKVELELKSVAPNVDVPSSSTTESSIDDHGDDHPIQQQEEYNIARDRTRRQIKLP 486


>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 507

 Score =  391 bits (1004), Expect = e-130
 Identities = 188/341 (55%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SERG+ ILS++ LL   +  +L  CEHC+ GKQ R+ F    H +K  LDYIHS
Sbjct: 49   MRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQHRIKFPKAQHSTKSTLDYIHS 108

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            D WGP+ +PS GG RY L+ IDDYSR  W++  K+KN  F  FK+WK L+EKQT K+++ 
Sbjct: 109  DCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHKNQAFKCFKEWKILMEKQTSKRVKR 168

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNGLEFC  +FN +CK EGI R  TVR TPQQNGVAERMNRTLLER RCLLSN+GLS
Sbjct: 169  LRTDNGLEFCSKEFNDYCKAEGIARQYTVRNTPQQNGVAERMNRTLLERARCLLSNAGLS 228

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            + FWAEA ST CYL+NRSP+T IDCKTP E+WS+ PA+YS LRVFGC  Y H+N+GKLEP
Sbjct: 229  RSFWAEAVSTTCYLINRSPSTIIDCKTPIEVWSNKPANYSLLRVFGCNAYYHVNEGKLEP 288

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            RSKKG+F+GY  GVKG++IW   P   K ++SRDV+FDE  +     E  V+     +  
Sbjct: 289  RSKKGLFMGYGDGVKGYRIW--SPAERKVILSRDVIFDESHLFYPSLEFTVSGK--NQKI 344

Query: 163  HKKVE------FEIENVKSSDKGSQSSPTQLPISEEIEETP 59
             K+VE        ++  KS D   +S   Q  + +    +P
Sbjct: 345  LKQVEDGKTSGSILDEEKSEDFNEESQQQQFRVDDSDPSSP 385


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  419 bits (1076), Expect = e-130
 Identities = 204/354 (57%), Positives = 257/354 (72%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+S RGL +LS R LL+G+  S L+ CEHC++GKQK+V+FSTG HK+ G+LDYIHS
Sbjct: 1009 MRLGHMSARGLEMLSNRNLLNGEKISTLEFCEHCVLGKQKKVTFSTGKHKTGGVLDYIHS 1068

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGP+ +PSKGG RY+LTFIDD+SRKVWV FLK K D F  FK+WK LVE Q  +KI+Y
Sbjct: 1069 DLWGPSKLPSKGGKRYLLTFIDDFSRKVWVRFLKTKGDAFEAFKEWKILVENQIERKIKY 1128

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNGLEFC  +FN FCK  GI RH TVR TPQQNGVAERMNRTLLE+ RC+L  + +S
Sbjct: 1129 LRTDNGLEFCSEEFNDFCKVHGIARHKTVRHTPQQNGVAERMNRTLLEKARCMLLQAKMS 1188

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWA+A  TA ++VNRSP ++ID KTP E+WS  P++YS LR+FGCPTY H+N+GKLEP
Sbjct: 1189 KVFWAKAVHTASHIVNRSPASAIDFKTPNEVWSGEPSNYSYLRIFGCPTYYHVNEGKLEP 1248

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            RSKK IF+GY  GVKG+K+W       K V+SRDV FDE S+L  +    V+ +     +
Sbjct: 1249 RSKKAIFVGYVDGVKGYKLWC--LSLLKFVVSRDVTFDESSILDPR---KVSMELSRNEN 1303

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVREKYTFGRDRIPRPTKKP 2
            +++VE  +E  K  D+ +QS       S++ EE    E YT  + R  R  +KP
Sbjct: 1304 NEQVELPVELTKKRDQETQSDE-----SKDAEELASNEPYTIAKGRDKRRIRKP 1352


>gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 785

 Score =  399 bits (1024), Expect = e-129
 Identities = 186/303 (61%), Positives = 234/303 (77%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            +RLGH+SE+GL+ILSKRGLL G    KL  CE C++GKQ+ V FS+G H SKGILDY+HS
Sbjct: 404  LRLGHMSEQGLSILSKRGLLDGSECGKLKCCETCVLGKQRGVKFSSGKHTSKGILDYVHS 463

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA + S    RY +TFIDDYS+KVWVYFLK K+++F  FK+WK ++EK T ++I+ 
Sbjct: 464  DLWGPAPVESHSRCRYFVTFIDDYSKKVWVYFLKTKDELFDWFKEWKIMIEKHTSRQIKT 523

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNGLEFCG +FN+FCK EGI+RH TVR TPQQNGVAERMN+TLL+R RC+  N+GLS
Sbjct: 524  LRTDNGLEFCGQEFNEFCKKEGILRHHTVRRTPQQNGVAERMNQTLLQRARCIRLNAGLS 583

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA +T  YLVNRSP+T+ID KTP+++W   P+DYS LR+FGCP Y H+NDGKLEP
Sbjct: 584  KKFWAEAVNTTAYLVNRSPSTAIDLKTPQDLWYDKPSDYSGLRIFGCPAYAHVNDGKLEP 643

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GY  GVKG+++W+ D +  K +ISRDV FDE +M   K E    ++  T   
Sbjct: 644  RAIKCIFLGYGTGVKGYRLWHFDSN--KVIISRDVTFDESAMFSQKEELVDLAERRTRRE 701

Query: 163  HKK 155
             KK
Sbjct: 702  IKK 704


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa]
          Length = 1009

 Score =  402 bits (1034), Expect = e-129
 Identities = 199/356 (55%), Positives = 253/356 (71%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRG+L GQS  KL  CEHC+ GK  RV F+T  H ++GILDY+HS
Sbjct: 259  MRLGHMSEIGLAELSKRGMLDGQSIGKLIFCEHCIFGKHHRVKFNTSTHTTEGILDYVHS 318

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGP    S GGARYM+T IDDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 319  DLWGPTCKTSFGGARYMMTIIDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 378

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LR DNG+EFC   F  +CK EGIVRH TV  TPQQNGVAERMNRT++ + RC+LSN+GL 
Sbjct: 379  LRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 438

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP E+WSS PA YS+LRVF C  Y H+++GKLEP
Sbjct: 439  KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEP 498

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VI+R+VVF E  ML  K   NV  ++  E +
Sbjct: 499  RAIKCIFLGYPSGVKGYKLWC--PETKKVVINRNVVFHESVMLHDKPSTNVPVES-QEKA 555

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K   +     P+ E+ + + V++  K +  +DR  R TK P
Sbjct: 556  SVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPP 611


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  405 bits (1041), Expect = e-128
 Identities = 198/356 (55%), Positives = 257/356 (72%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 399  MRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 458

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 459  DLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 518

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG++FC   F  +CK EGIVRH TV  TPQQNGVAERMNRT++ + RC+LSN+GL 
Sbjct: 519  LRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 578

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP ++WS  PA+YS+LRVFGC  Y H+++ KLEP
Sbjct: 579  KQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEP 638

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR+VVF E  ML  K   NV  ++  E +
Sbjct: 639  RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVVFHESVMLHDKPSTNVPVES-QEKA 695

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K + +     P+ E+ + + V++  K++  +D+  R  K P
Sbjct: 696  SVQVEHLISSGHAPEKENVAINLDAPVIEDSDSSIVQQSPKHSIAKDKPKRNIKPP 751


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  411 bits (1057), Expect = e-128
 Identities = 196/338 (57%), Positives = 255/338 (75%), Gaps = 3/338 (0%)
 Frame = -1

Query: 1060 RLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHSD 881
            RLGH+SE+GL+ILSK+GLLSG  T KL  CE C++GKQ+RV FS G H + G+L+YIHSD
Sbjct: 751  RLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSD 810

Query: 880  LWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRYL 701
            LWGP+ + S  G RY +TFIDD+SRKVWVYFLK K++VF  FK+WK +VEK+TGK ++ L
Sbjct: 811  LWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTL 870

Query: 700  RTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLSK 521
            RTDNGLEFC  DF++FC+ EGIVRH TVR TPQQNGVAERMN+TL++R RC+  ++GLSK
Sbjct: 871  RTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSK 930

Query: 520  DFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEPR 341
             FWAEA +TA YLVNRSP+T+ID KTP+E+WS  P++YS L++FGCP Y H++DGKLEPR
Sbjct: 931  KFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPR 990

Query: 340  SKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSML---KSKGEQNVTSDTYTE 170
            + K IF+GY  GVKG+++W  +  TPK +ISRDV FDE +M    K  G+   TS T   
Sbjct: 991  AMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSKT-DL 1049

Query: 169  SSHKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPV 56
             +++KVEFE++           +P +  + +  EE PV
Sbjct: 1050 GANQKVEFEVD-----------APMENGVDDTSEEQPV 1076


>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 634

 Score =  389 bits (1000), Expect = e-128
 Identities = 183/353 (51%), Positives = 240/353 (67%)
 Frame = -1

Query: 1060 RLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHSD 881
            RLGH+S+RGL  L+K+G+        L+ CEHC++GK  R+ FST  H S G+LDY+HSD
Sbjct: 85   RLGHVSQRGLDELAKQGVFGRDKIEPLEFCEHCVMGKASRLKFSTSTHSSGGVLDYVHSD 144

Query: 880  LWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRYL 701
            LWGP+   S GGARY L+ +DD+SRKVWVYFLK KN+VF  FK+WK LVE QTG+ ++ L
Sbjct: 145  LWGPSRTESHGGARYFLSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKL 204

Query: 700  RTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLSK 521
            RTDNGLEFC   F+KFC++ G+ RH TVRGTPQ+NG+AER NRT+LERVRC+L+++GL K
Sbjct: 205  RTDNGLEFCDEKFSKFCRENGVARHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPK 264

Query: 520  DFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEPR 341
             FW EA S+A Y +NR P+T+++ KTP+E+WS    DYSELRVFGC  Y HI   KLEPR
Sbjct: 265  SFWVEAVSSAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPR 324

Query: 340  SKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESSH 161
            + K IFIGYP GVKG+++W  +P   K +ISRDVVF+E+ M        V     ++   
Sbjct: 325  ALKFIFIGYPEGVKGYRLWCLEPGYKKCLISRDVVFNEIEMANLVKPSKVEIHEKSQDQT 384

Query: 160  KKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVREKYTFGRDRIPRPTKKP 2
             K+E E   +  +   +Q     L    + EE  + + Y+  RDR  R  K P
Sbjct: 385  IKIEVEFTVITEAKAATQRQQHILQQELDDEERSI-QSYSLARDRERRAHKAP 436


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  404 bits (1037), Expect = e-127
 Identities = 201/360 (55%), Positives = 254/360 (70%), Gaps = 6/360 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 347  MRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 406

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 407  DLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 466

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+E C   F  +CK EGIVRH TV  TPQQNGVAERMNRT++ + RC+LSN+ L 
Sbjct: 467  LRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLP 526

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP E+WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 527  KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 586

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R  K IF+GY +GVKG+K+W   P+T K VISR+VVF E  ML  K   NV  +     S
Sbjct: 587  RVIKCIFLGYLSGVKGYKLWC--PETKKVVISRNVVFHESIMLHDKPSTNVPVE-----S 639

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQL----PISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
             +KV  ++E++ SS    +     +    P+ E+ + + V++  K +  +DR  R TK P
Sbjct: 640  QEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPP 699


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  407 bits (1045), Expect = e-126
 Identities = 201/356 (56%), Positives = 254/356 (71%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH++E GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 438  MRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GG RYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 498  DLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 557

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIVRH TV  TPQQNGVAERMNRT++ + RCLLSN+GL 
Sbjct: 558  LRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLP 617

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP E+WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 618  KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 677

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR+VVF E  ML  K   NV  ++  E +
Sbjct: 678  RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVVFHESVMLHDKPSTNVPVES-QEKA 734

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K   +     P+ E+   + V++  K +  +DR  R  K P
Sbjct: 735  SVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPP 790


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  407 bits (1045), Expect = e-125
 Identities = 201/356 (56%), Positives = 254/356 (71%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH++E GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 645  MRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 704

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GG RYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 705  DLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 764

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIVRH TV  TPQQNGVAERMNRT++ + RCLLSN+GL 
Sbjct: 765  LRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLP 824

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP E+WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 825  KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 884

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR+VVF E  ML  K   NV  ++  E +
Sbjct: 885  RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVVFHESVMLHDKPSTNVPVES-QEKA 941

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K   +     P+ E+   + V++  K +  +DR  R  K P
Sbjct: 942  SVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPP 997


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  394 bits (1013), Expect = e-124
 Identities = 195/351 (55%), Positives = 252/351 (71%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS SKL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 438  MRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 498  DLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKI 557

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIVRH TV  TPQQNGVAERMNR ++ + RC+LSN+GL 
Sbjct: 558  LRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLP 617

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ + + KTP E+WS  PA+YS+L+VFGC  Y H+++GKLEP
Sbjct: 618  KQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 676

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+ VKG+K+W   P+T K VISR+VVF E  ML  K   NV  ++  E +
Sbjct: 677  RAIKCIFLGYPSSVKGYKLWC--PETKKVVISRNVVFHESIMLHDKPSTNVPVES-QEKA 733

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPR 17
              +VE  I +  + +K   +     P+ E+ + + V++  K +  +D+  R
Sbjct: 734  SVQVEHLINSGHAPEKEDVAINQDAPVIEDSDSSTVQQSPKRSIAKDKPKR 784


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  395 bits (1016), Expect = e-124
 Identities = 195/356 (54%), Positives = 249/356 (69%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 410  MRLGHMSEIGLAELSKRGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 469

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 470  DLWGPAHKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKI 529

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIV H T   TPQQN VAERMNRT++ + RC+LSN+GL 
Sbjct: 530  LRTDNGMEFCSKIFKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSNAGLP 589

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP  +ID KTP E+WS  P +YS+LRVFGC  Y H+++GKLEP
Sbjct: 590  KQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAHVDNGKLEP 649

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GY +GVKG+K+W   P+T K VISR+VVF E  +L  K   NV  ++  E +
Sbjct: 650  RAIKCIFLGYASGVKGYKLWC--PETKKVVISRNVVFHESVILHDKPSTNVPVES-QEKA 706

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K   +     P+ E+ + + V +  K +  +D+  R  K P
Sbjct: 707  SVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSIAKDKPKRNIKPP 762


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  390 bits (1003), Expect = e-124
 Identities = 183/300 (61%), Positives = 228/300 (76%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LS RGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 255  MRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 314

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T ++DYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 315  DLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKI 374

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGI+RH TV  TPQQNGVAERMNRT++ + RC+LSN+GL 
Sbjct: 375  LRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 434

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP  +ID KTP ++WS  PA+YS+L+VFGC  Y H+++GKLEP
Sbjct: 435  KQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 494

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR VVF E  ML  K   N+  ++  ++S
Sbjct: 495  RTIKCIFLGYPSGVKGYKLWC--PETKKVVISRYVVFHESVMLHDKPSTNIPVESQEKAS 552


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  396 bits (1017), Expect = e-124
 Identities = 185/335 (55%), Positives = 241/335 (71%), Gaps = 4/335 (1%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            +RLGH+ ERG+ ILSK  LL+G     L+ CEHC+ GK  R  F   +H++KG LDYIHS
Sbjct: 416  IRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHS 475

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            D WGP  + S GG R+ ++ IDDYSR  WVY +K+K++ F  FK+WK L+E QTGKKI+ 
Sbjct: 476  DCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKR 535

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNGLEFC  +F++FCKDEGI RH TVR TPQQNGVAERMN+TLLER RC+LSN+GL 
Sbjct: 536  LRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLD 595

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            + FWAEA STACYL+NR P+T I CKTP E+WS   ADYS L+ FGC  Y H+++GKLEP
Sbjct: 596  RRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEP 655

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+KKG+F+GY  GVKGF+IW   P   + ++SR+VVFDE  +L++  +   TS+  T S 
Sbjct: 656  RAKKGVFVGYGDGVKGFRIW--SPAEKRVIMSRNVVFDESPLLRTIVKPTTTSE--TGSL 711

Query: 163  HKKVEFEI----ENVKSSDKGSQSSPTQLPISEEI 71
             K+VEF++     ++K  ++  Q   T+  I E +
Sbjct: 712  DKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESM 746


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92543.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1170

 Score =  392 bits (1007), Expect = e-123
 Identities = 195/356 (54%), Positives = 251/356 (70%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS  KL  CEHC+ GK  RV F+T  H ++GILDY+HS
Sbjct: 473  MRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHNRVKFNTSTHTTEGILDYVHS 532

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            +LWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +V+KQT +K++ 
Sbjct: 533  NLWGPARKTSFGGARYMMTTVDDYSRKVWSYFLKHKYQAFDVFKEWKTMVKKQTERKVKI 592

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+E C   F  +CK EGIVRH TV  TPQQNGVAERM RT++ + RC+L   GL 
Sbjct: 593  LRTDNGMELCSKIFKSYCKCEGIVRHYTVPHTPQQNGVAERMKRTIISKSRCMLPYVGLP 652

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA STACYL+NRSP+ +ID KTP E+WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 653  KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEP 712

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR+VVF E  ML      NV  ++  E +
Sbjct: 713  RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVVFHESVMLYDNPSTNVPVES-QEKA 769

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K   +     P+SE+ + + +++  K +  +D+  R TK P
Sbjct: 770  SVQVEHLISSGHALEKEDVAINQDAPVSEDSDSSIIQQSPKRSIAKDKPKRNTKPP 825


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  394 bits (1011), Expect = e-123
 Identities = 194/356 (54%), Positives = 250/356 (70%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKR LL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 473  MRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 532

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARYM+T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT KK++ 
Sbjct: 533  DLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKI 592

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIV H TV  TPQQNGVAERMN  ++ + RC+LSN+ L 
Sbjct: 593  LRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLP 652

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWAEA ST CYL+NRSP+ + D KTP E+WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 653  KQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 712

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GYP+GVKG+K+W   P+T K VISR+VVF E  +L  K   NV  ++  E +
Sbjct: 713  RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVVFHESVILHDKPSTNVPVES-QEKA 769

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISEEIEETPVRE--KYTFGRDRIPRPTKKP 2
              +VE  I +  + +K + +     P+ E+ + + V++  K +  +D+  R  K P
Sbjct: 770  SVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPP 825


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  386 bits (992), Expect = e-123
 Identities = 188/329 (57%), Positives = 236/329 (71%)
 Frame = -1

Query: 1063 MRLGHISERGLTILSKRGLLSGQSTSKLDLCEHCLVGKQKRVSFSTGLHKSKGILDYIHS 884
            MRLGH+SE GL  LSKRGLL GQS  KL  CEHC+ GK KRV F+T  H ++GILDY+HS
Sbjct: 270  MRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 329

Query: 883  DLWGPASIPSKGGARYMLTFIDDYSRKVWVYFLKNKNDVFVNFKQWKALVEKQTGKKIRY 704
            DLWGPA   S GGARY++T +DDYSRKVW YFLK+K   F  FK+WK +VE+QT +K++ 
Sbjct: 330  DLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 389

Query: 703  LRTDNGLEFCGGDFNKFCKDEGIVRHLTVRGTPQQNGVAERMNRTLLERVRCLLSNSGLS 524
            LRTDNG+EFC   F  +CK EGIVRH     TPQQNGVAERMNRT++ + RC+LSN+GL 
Sbjct: 390  LRTDNGMEFCSKIFKSYCKSEGIVRHY----TPQQNGVAERMNRTIISKARCMLSNAGLP 445

Query: 523  KDFWAEAASTACYLVNRSPNTSIDCKTPEEIWSSHPADYSELRVFGCPTYVHINDGKLEP 344
            K FWA A ST CYL+NRSP+ +ID KTP ++WS  PA+YS+LRVFGC  Y H+++GKLEP
Sbjct: 446  KQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPANYSDLRVFGCTAYAHVDNGKLEP 505

Query: 343  RSKKGIFIGYPAGVKGFKIWYPDPDTPKSVISRDVVFDELSMLKSKGEQNVTSDTYTESS 164
            R+ K IF+GY +GVKG+K+W   P+T K VISR+VVF E  ML  K   NV  ++  ++S
Sbjct: 506  RAIKCIFLGYSSGVKGYKLWC--PETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKAS 563

Query: 163  HKKVEFEIENVKSSDKGSQSSPTQLPISE 77
               V+F   ++        + P Q  I E
Sbjct: 564  ---VQFPKRSIAKDKPKRNTKPPQRYIEE 589