BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036128
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX92270.1| retrovirus-related Pol polyprotein from transposo...   320   7e-98
ref|XP_011462193.1| PREDICTED: uncharacterized protein LOC105350...   313   8e-98
gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinen...   316   2e-96
ref|XP_011463578.1| PREDICTED: uncharacterized protein LOC105351...   303   1e-94
gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinen...   306   8e-94
ref|XP_020423926.1| uncharacterized protein LOC109950224 [Prunus...   291   1e-93
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   305   6e-92
gb|PNX68398.1| retrovirus-related Pol polyprotein from transposo...   275   4e-90
gb|KYP51292.1| Retrovirus-related Pol polyprotein from transposo...   274   5e-88
gb|PNX93928.1| hypothetical protein L195_g017092, partial [Trifo...   276   7e-84
ref|XP_008390021.1| PREDICTED: uncharacterized protein LOC103452...   276   8e-83
gb|PNX84937.1| retrovirus-related Pol polyprotein from transposo...   265   2e-82
ref|XP_008348733.1| PREDICTED: uncharacterized protein LOC103411...   273   2e-82
gb|PNX74828.1| retrovirus-related Pol polyprotein from transposo...   266   4e-82
ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa c...   276   8e-82
gb|PRQ38882.1| putative RNA-directed DNA polymerase [Rosa chinen...   276   8e-82
gb|PNX97998.1| retrovirus-related Pol polyprotein from transposo...   272   1e-81
gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus cap...   274   4e-81
gb|KYP42321.1| Copia protein [Cajanus cajan]                          274   5e-81
gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposo...   270   6e-81

>gb|PNX92270.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1246

 Score =  320 bits (819), Expect = 7e-98
 Identities = 158/237 (66%), Positives = 190/237 (80%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            RAFTTSISA +EPTSF  A  DPKW   M +EL AL  NGT +LQ LP  K P+GCKW+Y
Sbjct: 715  RAFTTSISAIKEPTSFHQAVKDPKWRFAMDEELRALHDNGTWSLQHLPPNKNPVGCKWVY 774

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIK+ PDGTIERYKARLVAKGY+Q++G DY ETFAPVAK VT+RLLLA AS+  WHL  L
Sbjct: 775  KIKFNPDGTIERYKARLVAKGYSQIEGFDYRETFAPVAKLVTVRLLLAVASSMNWHLRQL 834

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFL+GD+ EEVY+SLPPG+ RK ETRVCKLHKS+YGLKQ+    FIK++  L  A+
Sbjct: 835  DVNNAFLHGDLEEEVYMSLPPGYGRKGETRVCKLHKSLYGLKQASRQWFIKLSKVLILAD 894

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
            + QSK D+S+F+R  + + T LLIYVDD+I+AGN+L+EIE IKA L +QFKLKDLG+
Sbjct: 895  YTQSKSDHSLFVRHRDTSFTALLIYVDDIILAGNNLQEIERIKAHLMEQFKLKDLGN 951


>ref|XP_011462193.1| PREDICTED: uncharacterized protein LOC105350894 [Fragaria vesca
            subsp. vesca]
          Length = 843

 Score =  313 bits (801), Expect = 8e-98
 Identities = 148/236 (62%), Positives = 184/236 (77%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R F  ++S H+EP SF  A  +P+W T M+ E+ AL+ NGT +L PLP  KRPIGCKW+Y
Sbjct: 522  RVFIANLSIHKEPASFSQAVHNPEWQTAMRAEVAALQSNGTWSLVPLPPHKRPIGCKWVY 581

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            K+K KPDG +ERYKARLVAKGY+Q++G+DY ETFAPVAK  T+R+LL+ AS +GWHLH L
Sbjct: 582  KVKLKPDGNVERYKARLVAKGYSQIEGVDYRETFAPVAKLTTVRVLLSLASIQGWHLHQL 641

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFL+GD++EEVY+ LPPGF  K ETRVCKLHKS+YGLKQ+    FIK+++ALK A 
Sbjct: 642  DVNNAFLHGDLHEEVYMKLPPGFGGKGETRVCKLHKSLYGLKQASRQWFIKLSMALKAAG 701

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            F QS  DYS+F+R+H    T LL+YVDDVI+AGN L +I   K FL  +FKLKDLG
Sbjct: 702  FHQSWSDYSLFVRAHGSKFTALLVYVDDVILAGNSLNDITATKTFLSNRFKLKDLG 757


>gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1285

 Score =  316 bits (810), Expect = 2e-96
 Identities = 152/236 (64%), Positives = 186/236 (78%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R FT +I+  REPTSF  A  DPKW   M+ E+ AL+ N T +L P P  KRPIGCKW+Y
Sbjct: 754  RTFTANITLQREPTSFSQAVKDPKWREAMRLEVQALQDNKTWSLVPPPAHKRPIGCKWVY 813

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY PDGTIERYKARLVAKGY+QV+G+DY ETFAPVAK  T+R+LL+ A+ + WHLH L
Sbjct: 814  KIKYNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVRVLLSLAAQQNWHLHQL 873

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFLNGD++E+VY+ LPPGFERK E +VCKLHKS+YGL+Q+    F+K++ ALK A 
Sbjct: 874  DVNNAFLNGDLHEDVYMHLPPGFERKGEHKVCKLHKSLYGLRQASKQWFLKLSSALKSAG 933

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            F QS  DYSMF+RSH+GT T LL+YVDDVI+AGN+L +I   K+FL   FKLKD+G
Sbjct: 934  FKQSWSDYSMFVRSHQGTFTALLVYVDDVILAGNNLDDIIRTKSFLSSHFKLKDMG 989


>ref|XP_011463578.1| PREDICTED: uncharacterized protein LOC105351305 [Fragaria vesca
            subsp. vesca]
          Length = 807

 Score =  303 bits (777), Expect = 1e-94
 Identities = 148/244 (60%), Positives = 187/244 (76%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R F  ++S H+EPTSF  A   P+W   M  E+DAL+ N T +L PLP  KRPIGCKW+Y
Sbjct: 512  RFFAANLSVHKEPTSFTQAVQIPEWRDAMCKEIDALQSNHTWSLVPLPPHKRPIGCKWVY 571

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIK K DG++ERYKARLVAKGY+Q++G+DY ETFAPVAK  T+R+LL  AS KGW+LH L
Sbjct: 572  KIKLKADGSVERYKARLVAKGYSQIEGVDYRETFAPVAKLTTVRVLLGLASLKGWYLHQL 631

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNN+FL+GD+ EEVY+ LP GF  K ETRVC+LHKS+YGLKQ+    FIK+++ALK A 
Sbjct: 632  DVNNSFLHGDLTEEVYMKLPLGFGGKGETRVCRLHKSLYGLKQASRQWFIKLSMALKAAG 691

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGHTSL 722
            F QS  DYS+F+++H G  T+LL+Y+DDVI+AGN+L+EI   K FL  +FKLKDLG    
Sbjct: 692  FTQSWSDYSLFVKAHSGKLTVLLVYIDDVILAGNNLEEIIATKLFLSHRFKLKDLG---- 747

Query: 723  ELKW 734
            ELK+
Sbjct: 748  ELKY 751


>gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1080

 Score =  306 bits (785), Expect = 8e-94
 Identities = 146/236 (61%), Positives = 184/236 (77%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            +AFT +I+  +EP SF  A  +P+W   M  E+ AL++N T +L PLP  K+PIGCKW+Y
Sbjct: 577  KAFTVNITLEKEPRSFSQAVLEPRWREAMDKEIQALQENKTWSLVPLPPDKKPIGCKWVY 636

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIK+ PDGT+ERYKARLVAKGY+QV GIDY ETFAPVAK  T+R+LL+ A+ +GWHLH L
Sbjct: 637  KIKHNPDGTVERYKARLVAKGYSQVAGIDYRETFAPVAKLTTVRVLLSLAALQGWHLHQL 696

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFLNGD+YE+VY+ LPPGF RK E RVCKLHKS+YGLKQ+    F+K++ ALK A 
Sbjct: 697  DVNNAFLNGDLYEDVYMKLPPGFGRKGENRVCKLHKSVYGLKQASRQWFLKLSGALKAAG 756

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            F QS  DYS+F+R  +G  T LL+YVDDVI+AGN+L++I + K FL   FKLKD+G
Sbjct: 757  FNQSWSDYSLFVRHTQGRFTTLLVYVDDVILAGNNLQDIMETKHFLASHFKLKDMG 812


>ref|XP_020423926.1| uncharacterized protein LOC109950224 [Prunus persica]
          Length = 463

 Score =  291 bits (746), Expect = 1e-93
 Identities = 141/226 (62%), Positives = 175/226 (77%)
 Frame = +3

Query: 3   RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
           + +   ++  +EPTSF  A   P+W   MK E+DAL+ NGT +L  LP  KRPIGCKW+Y
Sbjct: 236 KTYLAQLTLLQEPTSFSQAVQIPQWRAAMKSEVDALQANGTWSLVSLPPHKRPIGCKWVY 295

Query: 183 KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
           K+K K DGT+ERYKARLVAKGY+QV+GIDY ETFA VAK VT+R+LL+ AS  GWHLH L
Sbjct: 296 KVKLKADGTVERYKARLVAKGYSQVEGIDYQETFASVAKLVTVRVLLSVASLHGWHLHQL 355

Query: 363 DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
           DVNNAFLNGD+ EEV++SLPPGF RK E RVC+LHKS+YGLKQ+    FIK++ ALK A 
Sbjct: 356 DVNNAFLNGDLDEEVFMSLPPGFGRKGENRVCQLHKSLYGLKQASRQWFIKLSTALKAAG 415

Query: 543 FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFL 680
           F QS+ DYS+F+R  EG    LL+YVDDVI+AGN+L++IE+ K FL
Sbjct: 416 FQQSRSDYSLFVRRQEGNFLALLVYVDDVILAGNNLEDIENTKLFL 461


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  305 bits (782), Expect = 6e-92
 Identities = 148/236 (62%), Positives = 181/236 (76%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            +AFT  I+  +EP SF  A  D +W   M  E+ AL+ N T +L PLP  K+PIGCKW+Y
Sbjct: 957  KAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVY 1016

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY PDGTIERYKARLVAKG++QV+GIDY ETFAPVAK  T+R+LL+ AS +GWHLH L
Sbjct: 1017 KIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQL 1076

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFLNGD+YE+VY+ LPPGF RK E RVCKLHKS+YGLKQ+    F+K++ ALK A 
Sbjct: 1077 DVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAG 1136

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            F QS  DYS+F R+ +G  T LL+YVDDVI+AGN L++I + K FL   FKLKD+G
Sbjct: 1137 FKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMG 1192


>gb|PNX68398.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 231

 Score =  275 bits (702), Expect = 4e-90
 Identities = 133/226 (58%), Positives = 164/226 (72%)
 Frame = +3

Query: 36  EPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYKIKYKPDGTIE 215
           EPTS+  A TD KW   M+ E+DALE N T T+ PLP G R IGCKWIYKIKY+ DG+IE
Sbjct: 1   EPTSYEQACTDAKWVAAMQSEIDALEANHTWTMVPLPTGHRAIGCKWIYKIKYQSDGSIE 60

Query: 216 RYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LDVNNAFLNGDI 395
           RYKARLVAKG+ Q +GIDY ETFAPVAK VT+R LL  A+ + WHLH +DV NAFL+GD+
Sbjct: 61  RYKARLVAKGFTQREGIDYKETFAPVAKLVTVRCLLTVAAVRNWHLHQMDVQNAFLHGDL 120

Query: 396 YEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANFIQSKCDYSMF 575
            EEVY+  PPGF R+ E  VC+LHKS+YGLKQ+    F K   ++    F QSK DYS+F
Sbjct: 121 LEEVYMQPPPGFRRQGEKLVCRLHKSLYGLKQASRSWFQKFASSVANMGFQQSKADYSLF 180

Query: 576 IRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
           I+    + T +L+YVDD+II GND   I ++K FL+  FK+KDLGH
Sbjct: 181 IKVDGASYTAILLYVDDMIITGNDEAAIHNLKHFLNSCFKIKDLGH 226


>gb|KYP51292.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 369

 Score =  274 bits (701), Expect = 5e-88
 Identities = 132/235 (56%), Positives = 172/235 (73%)
 Frame = +3

Query: 6   AFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYK 185
           +F  SISA  EPTSF++A ++  W   M+ EL ALEKN T +L  LP GKRP+GCKW+Y+
Sbjct: 34  SFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYR 93

Query: 186 IKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LD 365
           +KYK DG++ERYKARLVAKG+ Q +G+DY ETF+PV K  T+R LL+ A+A  W LH LD
Sbjct: 94  VKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLD 153

Query: 366 VNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANF 545
           V+NAFL+GD++EEVY+  PPGF+      VCKLHKS+YGLKQ+      K+T AL   NF
Sbjct: 154 VDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNF 213

Query: 546 IQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
           IQS  D+S+FI+    + T LL+YVDDV++ GND+ EI  +KA+L  QF +KDLG
Sbjct: 214 IQSSTDHSLFIKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLG 268


>gb|PNX93928.1| hypothetical protein L195_g017092, partial [Trifolium pratense]
          Length = 865

 Score =  276 bits (707), Expect = 7e-84
 Identities = 132/236 (55%), Positives = 175/236 (74%)
 Frame = +3

Query: 6    AFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYK 185
            AF  +I+AHREP S+  A  DP W   M  EL+ALE+N T +L PLP G +PIGCKW+YK
Sbjct: 345  AFLANITAHREPQSYDQAVHDPLWQDAMNAELEALEQNNTWSLVPLPSGHKPIGCKWVYK 404

Query: 186  IKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LD 365
            IKYK DGTIERYKARLVAKGY QV+GIDY ETF+P AK  T+R LL  A+A+ W +H LD
Sbjct: 405  IKYKSDGTIERYKARLVAKGYTQVEGIDYQETFSPTAKVTTLRCLLTVAAARNWFIHQLD 464

Query: 366  VNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANF 545
            V NAFL+GD++E VY+  PPG  R+ E  VC+L+KS+YGLKQ+    F   +  +++A +
Sbjct: 465  VQNAFLHGDLHELVYMEPPPGLRRQGENVVCRLNKSLYGLKQASRNWFSTFSEVIQKAGY 524

Query: 546  IQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
             QSK DYS+F +S   + T +LIYVDD+++ GNDL+E++ +K FL K+F++KDLG+
Sbjct: 525  QQSKADYSLFTKSQGTSFTAVLIYVDDILLTGNDLQEMKRLKEFLLKRFRIKDLGN 580


>ref|XP_008390021.1| PREDICTED: uncharacterized protein LOC103452291 [Malus domestica]
          Length = 1025

 Score =  276 bits (706), Expect = 8e-83
 Identities = 136/236 (57%), Positives = 167/236 (70%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            + F T ++  + PTSF  A  DPKW   M  E+  L  N T TL PLP  K PIGCKWIY
Sbjct: 504  KTFLTXLTIIKXPTSFSQAVQDPKWXDAMXKEIXXLHDNRTWTLVPLPPHKHPIGCKWIY 563

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            K+K K +G +ERYKARLVAKGY+ +  +DY E F PVAK   + +LL+ A   GWHLH L
Sbjct: 564  KVKLKXBGXVERYKARLVAKGYSXIXXLDYXEXFXPVAKLTXVXVLLSIAXIXGWHLHQL 623

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFL+GD+Y EVY+SL  G  RK ETRVCKLHKSIYGLKQ     FIK++ ALK A 
Sbjct: 624  DVNNAFLHGDLYXEVYMSLXXGXXRKGETRVCKLHKSIYGLKQXSRQWFIKLSSALKTAG 683

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            F QS  DYS+F+R+ + +   LL+YVDDVI+AGN+L+EIE+ K F+ + FKLKDLG
Sbjct: 684  FHQSWSDYSLFVRNXQXSFMALLVYVDDVILAGNNLREIEETKLFJSQHFKLKDLG 739


>gb|PNX84937.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  265 bits (676), Expect = 2e-82
 Identities = 134/230 (58%), Positives = 160/230 (69%)
 Frame = +3

Query: 30  HREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYKIKYKPDGT 209
           ++EP S+  A    +W  VM  E+ ALE N T  L PLP GK  IGCKW+YKIKY  DGT
Sbjct: 1   NKEPKSYSQAIQSAEWREVMAKEIHALESNNTWVLSPLPKGKSAIGCKWVYKIKYHSDGT 60

Query: 210 IERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LDVNNAFLNG 389
           +ERYKARLVAKGYNQV GIDY++TFAPVAK VT+RLLL+ A+ K W LH LDVNNAFL G
Sbjct: 61  VERYKARLVAKGYNQVHGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQG 120

Query: 390 DIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANFIQSKCDYS 569
           D+ EEVY+ LPPGF  K +  VCKL+KSIYGLKQ+    F K +  L Q  F QS  DYS
Sbjct: 121 DLNEEVYMKLPPGFSHKGKPCVCKLNKSIYGLKQASRQWFSKFSTTLIQKGFRQSISDYS 180

Query: 570 MFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGHTS 719
           +F      T+  +L+YVDD+II  N+   I DIK FL K F +KDLG+ S
Sbjct: 181 LFTYKSNQTTIFVLVYVDDIIITRNNEDAISDIKRFLAKAFSIKDLGNLS 230


>ref|XP_008348733.1| PREDICTED: uncharacterized protein LOC103411898, partial [Malus
            domestica]
          Length = 897

 Score =  273 bits (698), Expect = 2e-82
 Identities = 136/237 (57%), Positives = 168/237 (70%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R+F  +IS   EPT+F  A  DP+W  VM  EL ALE+N T TL  LP G R IGCKW+Y
Sbjct: 641  RSFACAISTLVEPTTFPQANGDPQWRAVMDSELLALEQNNTWTLTTLPPGHRAIGCKWVY 700

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY  DGTIERYKARLVAKG+ Q +GIDY ETFAPVAK +T+R LLA AS + W LH +
Sbjct: 701  KIKYNSDGTIERYKARLVAKGFTQREGIDYKETFAPVAKLITVRCLLAVASVRHWSLHQM 760

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DV+NAFL+GD+ EEVY+ LPPG  R+ E  VC+L+KS+YGLKQ+    F K + A+ QA 
Sbjct: 761  DVHNAFLHGDLCEEVYMQLPPGLHRQGEHNVCRLNKSLYGLKQASRSWFHKFSTAISQAG 820

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
            + QS  DYS+F +    + T +L+YVDD+II GND   I D+K FL   F +KDLGH
Sbjct: 821  YQQSMADYSLFTKVRGNSFTAVLLYVDDMIITGNDEAAIHDLKQFLQSHFSIKDLGH 877


>gb|PNX74828.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 612

 Score =  266 bits (680), Expect = 4e-82
 Identities = 133/237 (56%), Positives = 174/237 (73%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3   RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
           ++F  SISA  EP +F  A+    W   M  EL AL++N T ++  LPHGK PIGCKW+Y
Sbjct: 90  KSFCCSISATIEPKTFNQASKLDCWRKAMDAELLALDENKTWSIVDLPHGKNPIGCKWVY 149

Query: 183 KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
           KIKY  +G+IERYKARLVAKGY Q +GIDY +TF+PVAK  T+R LLA AS KGW L  L
Sbjct: 150 KIKYHANGSIERYKARLVAKGYTQTEGIDYFDTFSPVAKITTVRFLLALASIKGWDLEQL 209

Query: 363 DVNNAFLNGDIYEEVYISLPPGFERKEE-TRVCKLHKSIYGLKQSFH*LFIKITIALKQA 539
           DVNNAFL+GD+ EEVY+SLPPG+       +VCKLHKS+YGLKQ+    + K++ AL   
Sbjct: 210 DVNNAFLHGDLNEEVYMSLPPGYPSNTGFNKVCKLHKSLYGLKQASRQWYSKLSAALISL 269

Query: 540 NFIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            + QS  D+S++I+S++   T LL+YVDD+I+AGN  +EI+D+K FLD++FK+KDLG
Sbjct: 270 GYEQSVSDHSLYIKSNDSEFTALLVYVDDIILAGNSSQEIQDVKHFLDQKFKIKDLG 326


>ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa chinensis]
          Length = 2337

 Score =  276 bits (707), Expect = 8e-82
 Identities = 134/237 (56%), Positives = 174/237 (73%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R+F  +I+   EP SF +A  +P+W   M  E+ ALE N T +L PLP GK PIGCKW+Y
Sbjct: 1180 RSFIANITRSVEPNSFAEAIKNPQWQEAMTSEIQALEANNTWSLTPLPPGKEPIGCKWVY 1239

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY  DGTIERYKARLVAKGY QV+G+DY ETF+P AK  T R LLA A+++ W LH +
Sbjct: 1240 KIKYNSDGTIERYKARLVAKGYTQVEGVDYCETFSPTAKLTTFRCLLAIAASRNWSLHQM 1299

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DV NAFL+GD++EEVY+  PPGF R+ E  VC+L+KS+YGLKQ+    F K + A+++A 
Sbjct: 1300 DVQNAFLHGDLHEEVYMLPPPGFSRQGENLVCRLNKSLYGLKQASRNWFSKFSNAIQKAG 1359

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
            + QSK DYS+F R    + T +LIYVDD++I GND K IE +KAFL K+F++KDLG+
Sbjct: 1360 YRQSKADYSLFTRVVGNSFTAVLIYVDDIVITGNDPKAIELLKAFLHKEFRIKDLGN 1416


>gb|PRQ38882.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 2324

 Score =  276 bits (707), Expect = 8e-82
 Identities = 134/237 (56%), Positives = 174/237 (73%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            R+F  +I+   EP SF +A  +P+W   M  E+ ALE N T +L PLP GK PIGCKW+Y
Sbjct: 1180 RSFIANITRSVEPNSFAEAIKNPQWQEAMTSEIQALEANNTWSLTPLPPGKEPIGCKWVY 1239

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY  DGTIERYKARLVAKGY QV+G+DY ETF+P AK  T R LLA A+++ W LH +
Sbjct: 1240 KIKYNSDGTIERYKARLVAKGYTQVEGVDYCETFSPTAKLTTFRCLLAIAASRNWSLHQM 1299

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DV NAFL+GD++EEVY+  PPGF R+ E  VC+L+KS+YGLKQ+    F K + A+++A 
Sbjct: 1300 DVQNAFLHGDLHEEVYMLPPPGFSRQGENLVCRLNKSLYGLKQASRNWFSKFSNAIQKAG 1359

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
            + QSK DYS+F R    + T +LIYVDD++I GND K IE +KAFL K+F++KDLG+
Sbjct: 1360 YRQSKADYSLFTRVVGNSFTAVLIYVDDIVITGNDPKAIELLKAFLHKEFRIKDLGN 1416


>gb|PNX97998.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 964

 Score =  272 bits (696), Expect = 1e-81
 Identities = 138/239 (57%), Positives = 166/239 (69%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            RA   +I  ++EPTS+  A    +W   M  E+ ALE N T  L PLP+GK  IGCKW+Y
Sbjct: 441  RALLVNIIENKEPTSYSQAIKSAEWREAMAKEIHALESNNTWVLSPLPNGKTAIGCKWVY 500

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKY  DGT+ERYKARLVAKGYNQV GIDY+ETFAPVAK VT+RLLL+ A+ K W LH L
Sbjct: 501  KIKYHSDGTVERYKARLVAKGYNQVHGIDYHETFAPVAKLVTVRLLLSIAAIKNWSLHQL 560

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFL GD+ EEVY+ LPPGF  K +  VCKL+KSIYGLKQ+    F K +  L Q  
Sbjct: 561  DVNNAFLQGDLNEEVYMKLPPGFSHKGQPCVCKLNKSIYGLKQASRQWFSKFSTTLIQKG 620

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGHTS 719
            F QS  DYS+F      T+  +L+YVDD+II GN+   I DIK FL + F +KDLG+ S
Sbjct: 621  FHQSISDYSLFTFKSNHTTIFVLVYVDDIIITGNNDDAISDIKKFLAQAFSIKDLGNLS 679


>gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus capsularis]
          Length = 1245

 Score =  274 bits (700), Expect = 4e-81
 Identities = 135/236 (57%), Positives = 171/236 (72%)
 Frame = +3

Query: 3    RAFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIY 182
            +AF  +IS   EP SF  A   P+W   M+ EL ALE N T TL+ LP  K+PIGCKWI+
Sbjct: 724  KAFLAAISLRDEPKSFSQAVKSPQWREAMQKELAALENNNTWTLETLPPRKKPIGCKWIF 783

Query: 183  KIKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*L 362
            KIKYK DGTIERYKAR VAKGYNQ++G+D++ETFAPVAK VT+R LLA A+ K W LH L
Sbjct: 784  KIKYKSDGTIERYKARFVAKGYNQIEGMDFHETFAPVAKLVTVRCLLAIAAIKNWELHQL 843

Query: 363  DVNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQAN 542
            DVNNAFL+GD+ EEVY+SLPPG+  K ++RVC++ KS+YGLKQ+    F K   AL +  
Sbjct: 844  DVNNAFLHGDLDEEVYMSLPPGYGDKNDSRVCRVRKSLYGLKQASRNWFAKFFAALLEFG 903

Query: 543  FIQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            FIQS  DYS+F  +   +  ++L+YVDD+IIAG+D   I  +K  LD +F +KDLG
Sbjct: 904  FIQSTVDYSLFTLTTGSSFLVVLVYVDDLIIAGDDSVRIRSLKQHLDSRFHIKDLG 959


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  274 bits (701), Expect = 5e-81
 Identities = 132/235 (56%), Positives = 172/235 (73%)
 Frame = +3

Query: 6    AFTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYK 185
            +F  SISA  EPTSF++A ++  W   M+ EL ALEKN T +L  LP GKRP+GCKW+Y+
Sbjct: 936  SFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYR 995

Query: 186  IKYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LD 365
            +KYK DG++ERYKARLVAKG+ Q +G+DY ETF+PV K  T+R LL+ A+A  W LH LD
Sbjct: 996  VKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLD 1055

Query: 366  VNNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANF 545
            V+NAFL+GD++EEVY+  PPGF+      VCKLHKS+YGLKQ+      K+T AL   NF
Sbjct: 1056 VDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNF 1115

Query: 546  IQSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLG 710
            IQS  D+S+FI+    + T LL+YVDDV++ GND+ EI  +KA+L  QF +KDLG
Sbjct: 1116 IQSSTDHSLFIKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLG 1170


>gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 938

 Score =  270 bits (690), Expect = 6e-81
 Identities = 136/235 (57%), Positives = 166/235 (70%)
 Frame = +3

Query: 9    FTTSISAHREPTSFRDAATDPKWCTVMKDELDALEKNGT*TLQPLPHGKRPIGCKWIYKI 188
            F T+I  ++EP SF  A    +W   M  E+ ALE N T +L PLP GK  IGCKW+YKI
Sbjct: 613  FLTNIIGNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKI 672

Query: 189  KYKPDGTIERYKARLVAKGYNQVDGIDYNETFAPVAKHVTIRLLLATASAKGWHLH*LDV 368
            KY+ DG+IERYKA LVAKGY Q++GIDY++TFAPVAK VT+RLLL+ A+ K W LH LDV
Sbjct: 673  KYRSDGSIERYKACLVAKGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDV 732

Query: 369  NNAFLNGDIYEEVYISLPPGFERKEETRVCKLHKSIYGLKQSFH*LFIKITIALKQANFI 548
            NNAFL GD+ EEVY+ LPPGF RK ET VCKLHKSIYGLKQ+    F K +  L Q  F 
Sbjct: 733  NNAFLQGDLNEEVYMKLPPGFSRKGETYVCKLHKSIYGLKQASRQWFSKFSTTLIQRGFR 792

Query: 549  QSKCDYSMFIRSHEGTSTILLIYVDDVIIAGNDLKEIEDIKAFLDKQFKLKDLGH 713
            QS  DYS+F      TS  +L+Y+DD+II GN+   I +IK FL + F +KDLG+
Sbjct: 793  QSISDYSLFTYISGQTSVFVLVYIDDIIITGNNDDAIFNIKQFLAQSFSIKDLGN 847