BLASTX nr result

ID: Cheilocostus21_contig00036083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00036083
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411784.1| PREDICTED: zinc finger CCCH domain-containin...    70   3e-11
ref|XP_009411782.1| PREDICTED: zinc finger CCCH domain-containin...    70   3e-11
ref|XP_017698814.1| PREDICTED: zinc finger CCCH domain-containin...    64   5e-09
ref|XP_008792535.1| PREDICTED: zinc finger CCCH domain-containin...    64   5e-09

>ref|XP_009411784.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 733

 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 56/118 (47%), Positives = 63/118 (53%), Gaps = 20/118 (16%)
 Frame = +2

Query: 110 NRRFMGLQLLDLKSRSHFNHIA----NPSTIPI----ESNGRSSAPQEESTGQDENLNLA 265
           NRRFMGLQ+LDLK+R+HFN IA    N  T PI    +SNG SS  QEE T Q++N N  
Sbjct: 527 NRRFMGLQVLDLKNRNHFNSIATTTTNNITSPIIATTQSNGGSSTSQEEPTCQNKNSNPV 586

Query: 266 PA------AAEPSQKLXXXXXXXXXXP--ACKGESSAGEPISE-EDFVLQQ---SVEH 403
            A      AAEP QK           P    KGES  GEP  +  D   QQ   SVEH
Sbjct: 587 AAAAAVSVAAEPLQKAAQQSAVKSQKPDSVDKGESCDGEPTCKVADIGFQQSCSSVEH 644


>ref|XP_009411782.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Musa acuminata subsp. malaccensis]
 ref|XP_009411783.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 735

 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 56/118 (47%), Positives = 63/118 (53%), Gaps = 20/118 (16%)
 Frame = +2

Query: 110 NRRFMGLQLLDLKSRSHFNHIA----NPSTIPI----ESNGRSSAPQEESTGQDENLNLA 265
           NRRFMGLQ+LDLK+R+HFN IA    N  T PI    +SNG SS  QEE T Q++N N  
Sbjct: 529 NRRFMGLQVLDLKNRNHFNSIATTTTNNITSPIIATTQSNGGSSTSQEEPTCQNKNSNPV 588

Query: 266 PA------AAEPSQKLXXXXXXXXXXP--ACKGESSAGEPISE-EDFVLQQ---SVEH 403
            A      AAEP QK           P    KGES  GEP  +  D   QQ   SVEH
Sbjct: 589 AAAAAVSVAAEPLQKAAQQSAVKSQKPDSVDKGESCDGEPTCKVADIGFQQSCSSVEH 646


>ref|XP_017698814.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Phoenix dactylifera]
          Length = 730

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
 Frame = +2

Query: 113 RRFMGLQLLDLKSRSHFNH---------IANPSTIPIESNGRSSAPQEESTGQDENLNLA 265
           RRF+GLQLLDL +R+H            I+ P+ +P  ++G++S+ QE +  QD++LN  
Sbjct: 543 RRFLGLQLLDLTTRNHITSTATAAAATTISTPAIVPSPTDGKTSSNQEAAASQDKSLNSC 602

Query: 266 PAAAE--PSQKLXXXXXXXXXXPACKGESSAGEPISEEDFVLQQSVEH 403
            A AE  P               A   E SAG P   ED   Q+S+EH
Sbjct: 603 AAVAEQQPGSSPHGVAHQPGVNAAADKEESAGNPPHNEDGCSQESLEH 650


>ref|XP_008792535.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Phoenix dactylifera]
 ref|XP_017698813.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Phoenix dactylifera]
          Length = 732

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
 Frame = +2

Query: 113 RRFMGLQLLDLKSRSHFNH---------IANPSTIPIESNGRSSAPQEESTGQDENLNLA 265
           RRF+GLQLLDL +R+H            I+ P+ +P  ++G++S+ QE +  QD++LN  
Sbjct: 545 RRFLGLQLLDLTTRNHITSTATAAAATTISTPAIVPSPTDGKTSSNQEAAASQDKSLNSC 604

Query: 266 PAAAE--PSQKLXXXXXXXXXXPACKGESSAGEPISEEDFVLQQSVEH 403
            A AE  P               A   E SAG P   ED   Q+S+EH
Sbjct: 605 AAVAEQQPGSSPHGVAHQPGVNAAADKEESAGNPPHNEDGCSQESLEH 652


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